Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 SWR1YDR334W 4545 nt2.63□□□□□ -1.99
CAF120P53836 RTP1YMR185W 2946 nt2.62□□□□□ -1.99
CAF120P53836 AXL1YPR122W 3627 nt2.62□□□□□ -1.99
CAF120P53836 YKL225WYKL225W 348 nt2.62□□□□□ -1.99
CAF120P53836 CDC53YDL132W 2448 nt2.62□□□□□ -1.99
CAF120P53836 TBS1YBR150C 3285 nt2.61□□□□□ -1.99
CAF120P53836 NUP100YKL068W 2880 nt2.61□□□□□ -1.99
CAF120P53836 BCK1YJL095W 4437 nt2.6□□□□□ -1.99
CAF120P53836 YBL005W-BYBL005W-B 5268 nt2.6□□□□□ -1.99
CAF120P53836 YOR161W-AYOR161W-A 81 nt2.6□□□□□ -1.99
CAF120P53836 PKH2YOL100W 3246 nt2.6□□□□□ -1.99
CAF120P53836 ESC1YMR219W 4977 nt2.6□□□□□ -1.99
CAF120P53836 BNR1YIL159W 4128 nt2.59□□□□□ -1.99
CAF120P53836 YLR041WYLR041W 321 nt2.57□□□□□ -2
CAF120P53836 TUS1YLR425W 3924 nt2.56□□□□□ -2
CAF120P53836 MDS3YGL197W 4464 nt2.56□□□□□ -2
CAF120P53836 POL5YEL055C 3069 nt2.56□□□□□ -2
CAF120P53836 SCP160YJL080C 3669 nt2.55□□□□□ -2
CAF120P53836 ESL2YKR096W 3588 nt2.55□□□□□ -2
CAF120P53836 SEC26YDR238C 2922 nt2.54□□□□□ -2
CAF120P53836 UBP3YER151C 2739 nt2.52□□□□□ -2.01
CAF120P53836 TIM9YEL020W-A 264 nt2.51□□□□□ -2.01
CAF120P53836 RAD9YDR217C 3930 nt2.5□□□□□ -2.01
CAF120P53836 PSD2YGR170W 3417 nt2.5□□□□□ -2.01
CAF120P53836 YDL159W-AYDL159W-A 132 nt2.5□□□□□ -2.01
CAF120P53836 RSM22YKL155C 1887 nt2.5□□□□□ -2.01
CAF120P53836 SLI15YBR156C 2097 nt2.49□□□□□ -2.01
CAF120P53836 MSH5YDL154W 2706 nt2.49□□□□□ -2.01
CAF120P53836 RPM2YML091C 3609 nt2.49□□□□□ -2.01
CAF120P53836 NUM1YDR150W 8247 nt2.49□□□□□ -2.01
CAF120P53836 NUP170YBL079W 4509 nt2.49□□□□□ -2.01
CAF120P53836 SEC10YLR166C 2616 nt2.49□□□□□ -2.01
CAF120P53836 MET18YIL128W 3099 nt2.48□□□□□ -2.01
CAF120P53836 ADR1YDR216W 3972 nt2.48□□□□□ -2.01
CAF120P53836 NUP157YER105C 4176 nt2.48□□□□□ -2.01
CAF120P53836 UBR1YGR184C 5853 nt2.47□□□□□ -2.01
CAF120P53836 TRA1YHR099W 11235 nt2.47□□□□□ -2.01
CAF120P53836 PDR1YGL013C 3207 nt2.47□□□□□ -2.01
CAF120P53836 CDC60YPL160W 3273 nt2.46□□□□□ -2.01
CAF120P53836 VPS8YAL002W 3825 nt2.46□□□□□ -2.02
CAF120P53836 SEC21YNL287W 2808 nt2.46□□□□□ -2.02
CAF120P53836 YPR097WYPR097W 3222 nt2.46□□□□□ -2.02
CAF120P53836 BUD2YKL092C 3315 nt2.45□□□□□ -2.02
CAF120P53836 YEF3YLR249W 3135 nt2.44□□□□□ -2.02
CAF120P53836 ARP8YOR141C 2646 nt2.44□□□□□ -2.02
CAF120P53836 FRK1YPL141C 2598 nt2.44□□□□□ -2.02
CAF120P53836 TRM3YDL112W 4311 nt2.43□□□□□ -2.02
CAF120P53836 YOR055WYOR055W 435 nt2.42□□□□□ -2.02
CAF120P53836 PDR11YIL013C 4236 nt2.41□□□□□ -2.02
CAF120P53836 TOR1YJR066W 7413 nt2.41□□□□□ -2.02
CAF120P53836 AZF1YOR113W 2745 nt2.41□□□□□ -2.02
CAF120P53836 YDL073WYDL073W 2955 nt2.4□□□□□ -2.02
CAF120P53836 RAV1YJR033C 4074 nt2.4□□□□□ -2.03
CAF120P53836 ALY2YJL084C 3141 nt2.39□□□□□ -2.03
CAF120P53836 SMC6YLR383W 3345 nt2.39□□□□□ -2.03
CAF120P53836 WAR1YML076C 2835 nt2.39□□□□□ -2.03
CAF120P53836 YER172C-AYER172C-A 381 nt2.39□□□□□ -2.03
CAF120P53836 COA6YMR244C-A 315 nt2.39□□□□□ -2.03
CAF120P53836 YBR200W-AYBR200W-A 165 nt2.39□□□□□ -2.03
CAF120P53836 AGC1YPR021C 2709 nt2.39□□□□□ -2.03
CAF120P53836 SMC1YFL008W 3678 nt2.38□□□□□ -2.03
CAF120P53836 RGA1YOR127W 3024 nt2.38□□□□□ -2.03
CAF120P53836 ANS1YHR126C 480 nt2.38□□□□□ -2.03
CAF120P53836 SEY1YOR165W 2331 nt2.37□□□□□ -2.03
CAF120P53836 MGA2YIR033W 3342 nt2.37□□□□□ -2.03
CAF120P53836 SKI7YOR076C 2244 nt2.37□□□□□ -2.03
CAF120P53836 UFD4YKL010C 4452 nt2.36□□□□□ -2.03
CAF120P53836 SIR4YDR227W 4077 nt2.36□□□□□ -2.03
CAF120P53836 GIP3YPL137C 3831 nt2.36□□□□□ -2.03
CAF120P53836 KIP1YBL063W 3336 nt2.35□□□□□ -2.03
CAF120P53836 TRL1YJL087C 2484 nt2.35□□□□□ -2.03
CAF120P53836 PIK1YNL267W 3201 nt2.34□□□□□ -2.03
CAF120P53836 YGR122C-AYGR122C-A 129 nt2.34□□□□□ -2.03
CAF120P53836 GCN2YDR283C 4980 nt2.34□□□□□ -2.03
CAF120P53836 MYO2YOR326W 4725 nt2.34□□□□□ -2.03
CAF120P53836 RTT101YJL047C 2529 nt2.34□□□□□ -2.04
CAF120P53836 SFB2YNL049C 2631 nt2.33□□□□□ -2.04
CAF120P53836 RPL26BYGR034W 384 nt2.33□□□□□ -2.04
CAF120P53836 AI1Q0050 2505 nt2.32□□□□□ -2.04
CAF120P53836 BRE1YDL074C 2103 nt2.32□□□□□ -2.04
CAF120P53836 CSF1YLR087C 8877 nt2.31□□□□□ -2.04
CAF120P53836 YLR299C-AYLR299C-A 93 nt2.31□□□□□ -2.04
CAF120P53836 NNF2YGR089W 2811 nt2.3□□□□□ -2.04
CAF120P53836 MSB1YOR188W 3414 nt2.3□□□□□ -2.04
CAF120P53836 IRA2YOL081W 9240 nt2.3□□□□□ -2.04
CAF120P53836 SPF1YEL031W 3648 nt2.29□□□□□ -2.04
CAF120P53836 RPL41AYDL184C 78 nt2.29□□□□□ -2.04
CAF120P53836 snR38snR38 95 nt2.29□□□□□ -2.04
CAF120P53836 CTR9YOL145C 3234 nt2.29□□□□□ -2.04
CAF120P53836 SCD5YOR329C 2619 nt2.28□□□□□ -2.04
CAF120P53836 tD(GUC)QtD(GUC)Q 75 nt2.28□□□□□ -2.04
CAF120P53836 VPS13YLL040C 9435 nt2.27□□□□□ -2.05
CAF120P53836 PAN2YGL094C 3348 nt2.27□□□□□ -2.05
CAF120P53836 SYH1YPL105C 2550 nt2.26□□□□□ -2.05
CAF120P53836 TOF1YNL273W 3717 nt2.26□□□□□ -2.05
CAF120P53836 SEC16YPL085W 6588 nt2.26□□□□□ -2.05
CAF120P53836 SSD1YDR293C 3753 nt2.25□□□□□ -2.05
CAF120P53836 ROM2YLR371W 4071 nt2.24□□□□□ -2.05
CAF120P53836 SPO24YPR036W-A 204 nt2.24□□□□□ -2.05
CAF120P53836 YBR296C-AYBR296C-A 120 nt2.24□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 25.4 ms