Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
CLCN2P51788 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN2P51788 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN2P51788 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.35■□□□□ 0.69
CLCN2P51788 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CLCN2P51788 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN2P51788 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN2P51788 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN2P51788 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN2P51788 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.34■□□□□ 0.69
CLCN2P51788 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCN2P51788 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.34■□□□□ 0.69
CLCN2P51788 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCN2P51788 AC069236.1-201ENST00000604339 616 ntBASIC19.34■□□□□ 0.69
CLCN2P51788 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN2P51788 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.34■□□□□ 0.69
CLCN2P51788 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCN2P51788 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN2P51788 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN2P51788 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLCN2P51788 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCN2P51788 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLCN2P51788 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLCN2P51788 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CLCN2P51788 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.33■□□□□ 0.69
CLCN2P51788 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLCN2P51788 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLCN2P51788 AC007225.1-201ENST00000566331 1836 ntBASIC19.33■□□□□ 0.69
CLCN2P51788 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.33■□□□□ 0.69
CLCN2P51788 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLCN2P51788 CYP2T1P-201ENST00000432607 1285 ntBASIC19.33■□□□□ 0.68
CLCN2P51788 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.33■□□□□ 0.68
CLCN2P51788 AL162412.1-201ENST00000567129 965 ntBASIC19.33■□□□□ 0.68
CLCN2P51788 AC133552.2-202ENST00000575694 574 ntBASIC19.33■□□□□ 0.68
CLCN2P51788 AL109923.1-201ENST00000618799 583 ntBASIC19.33■□□□□ 0.68
CLCN2P51788 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN2P51788 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN2P51788 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.33■□□□□ 0.68
CLCN2P51788 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN2P51788 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CLCN2P51788 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN2P51788 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN2P51788 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CLCN2P51788 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN2P51788 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN2P51788 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.33■□□□□ 0.68
CLCN2P51788 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CLCN2P51788 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN2P51788 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN2P51788 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.32■□□□□ 0.68
CLCN2P51788 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLCN2P51788 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN2P51788 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLCN2P51788 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCN2P51788 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CLCN2P51788 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLCN2P51788 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCN2P51788 AC083906.2-201ENST00000511578 360 ntBASIC19.32■□□□□ 0.68
CLCN2P51788 AF201337.1-201ENST00000520239 748 ntBASIC19.32■□□□□ 0.68
CLCN2P51788 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCN2P51788 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.32■□□□□ 0.68
CLCN2P51788 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.32■□□□□ 0.68
CLCN2P51788 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN2P51788 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCN2P51788 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.32■□□□□ 0.68
CLCN2P51788 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN2P51788 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLCN2P51788 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN2P51788 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN2P51788 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN2P51788 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN2P51788 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN2P51788 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.32■□□□□ 0.68
CLCN2P51788 AL512408.1-201ENST00000569378 2000 ntBASIC19.32■□□□□ 0.68
CLCN2P51788 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN2P51788 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN2P51788 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CLCN2P51788 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN2P51788 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCN2P51788 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCN2P51788 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN2P51788 AC004408.2-201ENST00000623613 2777 ntBASIC19.31■□□□□ 0.68
CLCN2P51788 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CLCN2P51788 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.31■□□□□ 0.68
CLCN2P51788 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLCN2P51788 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN2P51788 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCN2P51788 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCN2P51788 AC104771.1-201ENST00000603335 964 ntBASIC19.31■□□□□ 0.68
CLCN2P51788 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN2P51788 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN2P51788 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN2P51788 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN2P51788 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLCN2P51788 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
CLCN2P51788 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN2P51788 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLCN2P51788 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLCN2P51788 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.3■□□□□ 0.68
CLCN2P51788 AC091799.1-201ENST00000422823 811 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms