Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.01■□□□□ 0.95
MTHFRP42898 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
MTHFRP42898 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.01■□□□□ 0.95
MTHFRP42898 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.01■□□□□ 0.95
MTHFRP42898 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.01■□□□□ 0.95
MTHFRP42898 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
MTHFRP42898 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.01■□□□□ 0.95
MTHFRP42898 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.01■□□□□ 0.95
MTHFRP42898 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MTHFRP42898 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
MTHFRP42898 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MTHFRP42898 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.01■□□□□ 0.95
MTHFRP42898 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MTHFRP42898 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MTHFRP42898 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.01■□□□□ 0.95
MTHFRP42898 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MTHFRP42898 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MTHFRP42898 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MTHFRP42898 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21■□□□□ 0.95
MTHFRP42898 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MTHFRP42898 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21■□□□□ 0.95
MTHFRP42898 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21■□□□□ 0.95
MTHFRP42898 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21■□□□□ 0.95
MTHFRP42898 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21■□□□□ 0.95
MTHFRP42898 AL137013.1-201ENST00000432946 1228 ntBASIC21■□□□□ 0.95
MTHFRP42898 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21■□□□□ 0.95
MTHFRP42898 KRT18P57-201ENST00000443599 1254 ntBASIC21■□□□□ 0.95
MTHFRP42898 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21■□□□□ 0.95
MTHFRP42898 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21■□□□□ 0.95
MTHFRP42898 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
MTHFRP42898 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21■□□□□ 0.95
MTHFRP42898 DUT-205ENST00000558813 769 ntTSL 2 BASIC21■□□□□ 0.95
MTHFRP42898 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21■□□□□ 0.95
MTHFRP42898 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
MTHFRP42898 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21■□□□□ 0.95
MTHFRP42898 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
MTHFRP42898 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MTHFRP42898 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MTHFRP42898 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MTHFRP42898 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
MTHFRP42898 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MTHFRP42898 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.99■□□□□ 0.95
MTHFRP42898 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MTHFRP42898 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MTHFRP42898 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
MTHFRP42898 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
MTHFRP42898 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MTHFRP42898 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.99■□□□□ 0.95
MTHFRP42898 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MTHFRP42898 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MTHFRP42898 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MTHFRP42898 FITM1-202ENST00000559294 800 ntBASIC20.99■□□□□ 0.95
MTHFRP42898 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.99■□□□□ 0.95
MTHFRP42898 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MTHFRP42898 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MTHFRP42898 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MTHFRP42898 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.99■□□□□ 0.95
MTHFRP42898 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
MTHFRP42898 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MTHFRP42898 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MTHFRP42898 TERF1P1-201ENST00000311003 1181 ntBASIC20.98■□□□□ 0.95
MTHFRP42898 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MTHFRP42898 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MTHFRP42898 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
MTHFRP42898 KSR1P1-201ENST00000446298 240 ntBASIC20.98■□□□□ 0.95
MTHFRP42898 AC116562.2-201ENST00000507042 360 ntBASIC20.98■□□□□ 0.95
MTHFRP42898 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.98■□□□□ 0.95
MTHFRP42898 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MTHFRP42898 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
MTHFRP42898 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MTHFRP42898 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MTHFRP42898 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MTHFRP42898 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MTHFRP42898 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MTHFRP42898 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MTHFRP42898 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MTHFRP42898 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MTHFRP42898 AC011484.1-201ENST00000377652 1995 ntBASIC20.97■□□□□ 0.95
MTHFRP42898 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MTHFRP42898 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MTHFRP42898 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
MTHFRP42898 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MTHFRP42898 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MTHFRP42898 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MTHFRP42898 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.97■□□□□ 0.95
MTHFRP42898 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.97■□□□□ 0.95
MTHFRP42898 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.97■□□□□ 0.95
MTHFRP42898 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MTHFRP42898 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.97■□□□□ 0.95
MTHFRP42898 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
MTHFRP42898 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MTHFRP42898 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.96■□□□□ 0.95
MTHFRP42898 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MTHFRP42898 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MTHFRP42898 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
MTHFRP42898 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MTHFRP42898 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MTHFRP42898 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MTHFRP42898 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MTHFRP42898 CR392000.1-201ENST00000624770 1228 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms