Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CKS2P33552 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.73□□□□□ -0.05
CKS2P33552 AC239859.2-201ENST00000444165 318 ntBASIC14.73□□□□□ -0.05
CKS2P33552 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.73□□□□□ -0.05
CKS2P33552 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.73□□□□□ -0.05
CKS2P33552 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CKS2P33552 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
CKS2P33552 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CKS2P33552 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.73□□□□□ -0.05
CKS2P33552 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.73□□□□□ -0.05
CKS2P33552 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.73□□□□□ -0.05
CKS2P33552 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS2P33552 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.72□□□□□ -0.05
CKS2P33552 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CKS2P33552 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS2P33552 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CKS2P33552 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.72□□□□□ -0.05
CKS2P33552 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CKS2P33552 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.72□□□□□ -0.05
CKS2P33552 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS2P33552 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS2P33552 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS2P33552 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CKS2P33552 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CKS2P33552 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
CKS2P33552 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.72□□□□□ -0.05
CKS2P33552 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CKS2P33552 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS2P33552 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS2P33552 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.72□□□□□ -0.05
CKS2P33552 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.72□□□□□ -0.05
CKS2P33552 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CKS2P33552 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.72□□□□□ -0.05
CKS2P33552 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS2P33552 AC009237.3-201ENST00000393279 1427 ntBASIC14.72□□□□□ -0.05
CKS2P33552 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS2P33552 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS2P33552 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKS2P33552 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CKS2P33552 AC093503.3-201ENST00000624917 2352 ntBASIC14.71□□□□□ -0.05
CKS2P33552 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS2P33552 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
CKS2P33552 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CKS2P33552 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CKS2P33552 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS2P33552 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CKS2P33552 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS2P33552 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.71□□□□□ -0.05
CKS2P33552 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS2P33552 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.71□□□□□ -0.05
CKS2P33552 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS2P33552 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CKS2P33552 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.71□□□□□ -0.05
CKS2P33552 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.71□□□□□ -0.05
CKS2P33552 SMUG1P1-201ENST00000590640 811 ntBASIC14.71□□□□□ -0.05
CKS2P33552 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS2P33552 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS2P33552 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CKS2P33552 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS2P33552 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.71□□□□□ -0.05
CKS2P33552 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
CKS2P33552 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CKS2P33552 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CKS2P33552 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CKS2P33552 NEFHP1-201ENST00000412845 2629 ntBASIC14.71□□□□□ -0.06
CKS2P33552 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CKS2P33552 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CKS2P33552 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CKS2P33552 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CKS2P33552 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CKS2P33552 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.71□□□□□ -0.06
CKS2P33552 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.7□□□□□ -0.06
CKS2P33552 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 AP004607.4-201ENST00000530158 1459 ntBASIC14.7□□□□□ -0.06
CKS2P33552 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.7□□□□□ -0.06
CKS2P33552 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.7□□□□□ -0.06
CKS2P33552 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
CKS2P33552 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CKS2P33552 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms