Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CD74P04233 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.82■□□□□ 0.28
CD74P04233 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.82■□□□□ 0.28
CD74P04233 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.82■□□□□ 0.28
CD74P04233 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CD74P04233 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CD74P04233 TSPY26P-201ENST00000476365 1326 ntBASIC16.82■□□□□ 0.28
CD74P04233 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CD74P04233 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.82■□□□□ 0.28
CD74P04233 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.82■□□□□ 0.28
CD74P04233 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CD74P04233 AL035685.1-201ENST00000636663 812 ntBASIC16.82■□□□□ 0.28
CD74P04233 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD74P04233 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.81■□□□□ 0.28
CD74P04233 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.81■□□□□ 0.28
CD74P04233 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CD74P04233 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.81■□□□□ 0.28
CD74P04233 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.81■□□□□ 0.28
CD74P04233 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD74P04233 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.81■□□□□ 0.28
CD74P04233 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CD74P04233 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.81■□□□□ 0.28
CD74P04233 AC138907.5-202ENST00000569484 235 ntBASIC16.81■□□□□ 0.28
CD74P04233 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.81■□□□□ 0.28
CD74P04233 AC120498.10-201ENST00000621827 505 ntBASIC16.81■□□□□ 0.28
CD74P04233 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD74P04233 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CD74P04233 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.81■□□□□ 0.28
CD74P04233 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD74P04233 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CD74P04233 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD74P04233 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CD74P04233 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.81■□□□□ 0.28
CD74P04233 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CD74P04233 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD74P04233 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD74P04233 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.8■□□□□ 0.28
CD74P04233 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD74P04233 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD74P04233 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CD74P04233 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD74P04233 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.8■□□□□ 0.28
CD74P04233 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD74P04233 MIR572-201ENST00000384983 95 ntBASIC16.8■□□□□ 0.28
CD74P04233 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CD74P04233 AC131281.2-201ENST00000520478 145 ntBASIC16.8■□□□□ 0.28
CD74P04233 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD74P04233 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD74P04233 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CD74P04233 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.8■□□□□ 0.28
CD74P04233 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD74P04233 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD74P04233 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CD74P04233 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.79■□□□□ 0.28
CD74P04233 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CD74P04233 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.79■□□□□ 0.28
CD74P04233 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.79■□□□□ 0.28
CD74P04233 AC005082.1-201ENST00000413042 2259 ntBASIC16.79■□□□□ 0.28
CD74P04233 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD74P04233 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CD74P04233 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.79■□□□□ 0.28
CD74P04233 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.79■□□□□ 0.28
CD74P04233 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.79■□□□□ 0.28
CD74P04233 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.79■□□□□ 0.28
CD74P04233 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CD74P04233 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CD74P04233 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms