Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.4■■□□□ 1.18
PGK1P00558 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
PGK1P00558 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.39■■□□□ 1.18
PGK1P00558 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PGK1P00558 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PGK1P00558 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PGK1P00558 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.39■■□□□ 1.17
PGK1P00558 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.39■■□□□ 1.17
PGK1P00558 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.39■■□□□ 1.17
PGK1P00558 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.39■■□□□ 1.17
PGK1P00558 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.39■■□□□ 1.17
PGK1P00558 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
PGK1P00558 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PGK1P00558 ECEL1P1-201ENST00000373592 1742 ntBASIC22.39■■□□□ 1.17
PGK1P00558 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PGK1P00558 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PGK1P00558 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.39■■□□□ 1.17
PGK1P00558 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
PGK1P00558 PTBP1P-201ENST00000554374 1601 ntBASIC22.39■■□□□ 1.17
PGK1P00558 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.38■■□□□ 1.17
PGK1P00558 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.38■■□□□ 1.17
PGK1P00558 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PGK1P00558 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PGK1P00558 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.38■■□□□ 1.17
PGK1P00558 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.38■■□□□ 1.17
PGK1P00558 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.38■■□□□ 1.17
PGK1P00558 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.38■■□□□ 1.17
PGK1P00558 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.38■■□□□ 1.17
PGK1P00558 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.38■■□□□ 1.17
PGK1P00558 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.38■■□□□ 1.17
PGK1P00558 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PGK1P00558 KRT16P1-201ENST00000399124 1418 ntBASIC22.38■■□□□ 1.17
PGK1P00558 AC073508.3-201ENST00000619697 1419 ntBASIC22.38■■□□□ 1.17
PGK1P00558 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PGK1P00558 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PGK1P00558 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.37■■□□□ 1.17
PGK1P00558 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PGK1P00558 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PGK1P00558 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PGK1P00558 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PGK1P00558 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
PGK1P00558 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PGK1P00558 HLA-G-202ENST00000376815 851 ntBASIC22.37■■□□□ 1.17
PGK1P00558 HLA-G-203ENST00000376818 1127 ntBASIC22.37■■□□□ 1.17
PGK1P00558 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PGK1P00558 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.37■■□□□ 1.17
PGK1P00558 SLC25A3P1-201ENST00000443844 931 ntBASIC22.37■■□□□ 1.17
PGK1P00558 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PGK1P00558 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PGK1P00558 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.37■■□□□ 1.17
PGK1P00558 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.37■■□□□ 1.17
PGK1P00558 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PGK1P00558 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.37■■□□□ 1.17
PGK1P00558 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PGK1P00558 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PGK1P00558 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PGK1P00558 AC244015.2-201ENST00000616358 1861 ntBASIC22.37■■□□□ 1.17
PGK1P00558 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
PGK1P00558 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PGK1P00558 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PGK1P00558 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.36■■□□□ 1.17
PGK1P00558 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.36■■□□□ 1.17
PGK1P00558 AC079834.2-201ENST00000609776 1949 ntBASIC22.36■■□□□ 1.17
PGK1P00558 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.36■■□□□ 1.17
PGK1P00558 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.36■■□□□ 1.17
PGK1P00558 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.36■■□□□ 1.17
PGK1P00558 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.36■■□□□ 1.17
PGK1P00558 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PGK1P00558 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.36■■□□□ 1.17
PGK1P00558 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PGK1P00558 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.35■■□□□ 1.17
PGK1P00558 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PGK1P00558 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PGK1P00558 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.35■■□□□ 1.17
PGK1P00558 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.35■■□□□ 1.17
PGK1P00558 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PGK1P00558 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PGK1P00558 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PGK1P00558 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.34■■□□□ 1.17
PGK1P00558 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PGK1P00558 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PGK1P00558 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.34■■□□□ 1.17
PGK1P00558 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PGK1P00558 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PGK1P00558 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PGK1P00558 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PGK1P00558 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PGK1P00558 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.34■■□□□ 1.17
PGK1P00558 AC104076.2-201ENST00000448912 469 ntBASIC22.34■■□□□ 1.17
PGK1P00558 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PGK1P00558 NTF6B-201ENST00000591913 560 ntBASIC22.34■■□□□ 1.17
PGK1P00558 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.34■■□□□ 1.17
PGK1P00558 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.34■■□□□ 1.17
PGK1P00558 Z98882.1-201ENST00000622160 2253 ntBASIC22.34■■□□□ 1.17
PGK1P00558 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PGK1P00558 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PGK1P00558 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PGK1P00558 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.33■■□□□ 1.17
PGK1P00558 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.33■■□□□ 1.17
PGK1P00558 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms