Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL3O95164 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL3O95164 PGM5P4-201ENST00000421970 445 ntBASIC17.93■□□□□ 0.46
UBL3O95164 CROCCP5-201ENST00000436658 830 ntBASIC17.93■□□□□ 0.46
UBL3O95164 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.93■□□□□ 0.46
UBL3O95164 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBL3O95164 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.93■□□□□ 0.46
UBL3O95164 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBL3O95164 AC133552.2-202ENST00000575694 574 ntBASIC17.93■□□□□ 0.46
UBL3O95164 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL3O95164 AC100791.3-201ENST00000617619 330 ntBASIC17.93■□□□□ 0.46
UBL3O95164 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL3O95164 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
UBL3O95164 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.93■□□□□ 0.46
UBL3O95164 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
UBL3O95164 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL3O95164 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.93■□□□□ 0.46
UBL3O95164 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL3O95164 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL3O95164 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL3O95164 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.93■□□□□ 0.46
UBL3O95164 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBL3O95164 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL3O95164 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL3O95164 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
UBL3O95164 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL3O95164 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL3O95164 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL3O95164 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL3O95164 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBL3O95164 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL3O95164 AC090192.1-201ENST00000517740 490 ntBASIC17.92■□□□□ 0.46
UBL3O95164 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
UBL3O95164 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL3O95164 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBL3O95164 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.92■□□□□ 0.46
UBL3O95164 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.92■□□□□ 0.46
UBL3O95164 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.92■□□□□ 0.46
UBL3O95164 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBL3O95164 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
UBL3O95164 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBL3O95164 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
UBL3O95164 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL3O95164 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL3O95164 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.91■□□□□ 0.46
UBL3O95164 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.91■□□□□ 0.46
UBL3O95164 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.91■□□□□ 0.46
UBL3O95164 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL3O95164 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBL3O95164 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.91■□□□□ 0.46
UBL3O95164 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.91■□□□□ 0.46
UBL3O95164 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL3O95164 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.91■□□□□ 0.46
UBL3O95164 AL512625.2-201ENST00000417533 625 ntBASIC17.91■□□□□ 0.46
UBL3O95164 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBL3O95164 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.91■□□□□ 0.46
UBL3O95164 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL3O95164 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
UBL3O95164 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.91■□□□□ 0.46
UBL3O95164 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBL3O95164 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.91■□□□□ 0.46
UBL3O95164 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL3O95164 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBL3O95164 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL3O95164 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
UBL3O95164 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.9■□□□□ 0.46
UBL3O95164 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
UBL3O95164 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL3O95164 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.9■□□□□ 0.46
UBL3O95164 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBL3O95164 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.9■□□□□ 0.46
UBL3O95164 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UBL3O95164 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
UBL3O95164 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL3O95164 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL3O95164 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL3O95164 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL3O95164 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL3O95164 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.9■□□□□ 0.46
UBL3O95164 AF201337.1-201ENST00000520239 748 ntBASIC17.9■□□□□ 0.46
UBL3O95164 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UBL3O95164 AL121832.2-201ENST00000610979 668 ntBASIC17.9■□□□□ 0.46
UBL3O95164 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.9■□□□□ 0.46
UBL3O95164 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UBL3O95164 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
UBL3O95164 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBL3O95164 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.9■□□□□ 0.46
UBL3O95164 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBL3O95164 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL3O95164 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBL3O95164 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBL3O95164 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBL3O95164 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
UBL3O95164 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBL3O95164 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBL3O95164 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.89■□□□□ 0.45
UBL3O95164 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBL3O95164 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UBL3O95164 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBL3O95164 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 271.9 ms