Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PTCD1O75127 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
PTCD1O75127 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
PTCD1O75127 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.72
PTCD1O75127 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.72
PTCD1O75127 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
PTCD1O75127 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PTCD1O75127 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PTCD1O75127 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
PTCD1O75127 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.82■■□□□ 1.72
PTCD1O75127 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.82■■□□□ 1.72
PTCD1O75127 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
PTCD1O75127 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PTCD1O75127 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
PTCD1O75127 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PTCD1O75127 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PTCD1O75127 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PTCD1O75127 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PTCD1O75127 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PTCD1O75127 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.81■■□□□ 1.72
PTCD1O75127 HLA-G-202ENST00000376815 851 ntBASIC25.81■■□□□ 1.72
PTCD1O75127 HLA-G-203ENST00000376818 1127 ntBASIC25.81■■□□□ 1.72
PTCD1O75127 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.81■■□□□ 1.72
PTCD1O75127 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PTCD1O75127 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.81■■□□□ 1.72
PTCD1O75127 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
PTCD1O75127 MIR1238-201ENST00000408483 83 ntBASIC25.8■■□□□ 1.72
PTCD1O75127 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PTCD1O75127 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PTCD1O75127 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PTCD1O75127 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PTCD1O75127 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.79■■□□□ 1.72
PTCD1O75127 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PTCD1O75127 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.79■■□□□ 1.72
PTCD1O75127 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PTCD1O75127 UNC93B2-201ENST00000285383 730 ntBASIC25.79■■□□□ 1.72
PTCD1O75127 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PTCD1O75127 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.79■■□□□ 1.72
PTCD1O75127 AC145285.6-201ENST00000604632 637 ntBASIC25.79■■□□□ 1.72
PTCD1O75127 CR392000.1-201ENST00000624770 1228 ntBASIC25.79■■□□□ 1.72
PTCD1O75127 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
PTCD1O75127 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PTCD1O75127 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
PTCD1O75127 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD1O75127 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD1O75127 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.78■■□□□ 1.72
PTCD1O75127 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD1O75127 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD1O75127 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD1O75127 AL390955.1-201ENST00000428694 934 ntBASIC25.78■■□□□ 1.72
PTCD1O75127 KRT18P35-201ENST00000510488 1269 ntBASIC25.78■■□□□ 1.72
PTCD1O75127 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.78■■□□□ 1.72
PTCD1O75127 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.78■■□□□ 1.72
PTCD1O75127 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.78■■□□□ 1.72
PTCD1O75127 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD1O75127 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD1O75127 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD1O75127 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD1O75127 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD1O75127 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD1O75127 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.78■■□□□ 1.72
PTCD1O75127 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.78■■□□□ 1.72
PTCD1O75127 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD1O75127 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
PTCD1O75127 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD1O75127 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.77■■□□□ 1.72
PTCD1O75127 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD1O75127 PLK5-205ENST00000642079 1969 ntBASIC25.77■■□□□ 1.72
PTCD1O75127 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD1O75127 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.77■■□□□ 1.72
PTCD1O75127 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD1O75127 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD1O75127 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.77■■□□□ 1.72
PTCD1O75127 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC25.77■■□□□ 1.72
PTCD1O75127 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD1O75127 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD1O75127 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC25.77■■□□□ 1.72
PTCD1O75127 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC25.77■■□□□ 1.72
PTCD1O75127 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC25.77■■□□□ 1.72
PTCD1O75127 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD1O75127 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC25.77■■□□□ 1.72
PTCD1O75127 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.77■■□□□ 1.72
PTCD1O75127 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
PTCD1O75127 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC25.77■■□□□ 1.72
PTCD1O75127 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD1O75127 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD1O75127 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
PTCD1O75127 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.77■■□□□ 1.72
PTCD1O75127 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD1O75127 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD1O75127 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.77■■□□□ 1.72
PTCD1O75127 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.72
PTCD1O75127 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
PTCD1O75127 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PTCD1O75127 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PTCD1O75127 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PTCD1O75127 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
PTCD1O75127 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC25.76■■□□□ 1.71
PTCD1O75127 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25.76■■□□□ 1.71
PTCD1O75127 AL031963.3-201ENST00000606441 850 ntBASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms