Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH17O14917 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH17O14917 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH17O14917 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH17O14917 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH17O14917 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDH17O14917 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH17O14917 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH17O14917 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH17O14917 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH17O14917 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH17O14917 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PCDH17O14917 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH17O14917 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH17O14917 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH17O14917 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH17O14917 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH17O14917 C2orf69P4-201ENST00000565394 541 ntBASIC19.09■□□□□ 0.65
PCDH17O14917 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDH17O14917 AL356652.1-201ENST00000615962 565 ntBASIC19.09■□□□□ 0.65
PCDH17O14917 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH17O14917 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH17O14917 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH17O14917 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
PCDH17O14917 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH17O14917 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDH17O14917 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDH17O14917 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH17O14917 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH17O14917 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH17O14917 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDH17O14917 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH17O14917 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH17O14917 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH17O14917 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.08■□□□□ 0.65
PCDH17O14917 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH17O14917 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
PCDH17O14917 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH17O14917 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH17O14917 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH17O14917 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH17O14917 KRT18P29-201ENST00000397031 1267 ntBASIC19.08■□□□□ 0.64
PCDH17O14917 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDH17O14917 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.08■□□□□ 0.64
PCDH17O14917 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH17O14917 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
PCDH17O14917 AC026366.1-201ENST00000488803 879 ntBASIC19.08■□□□□ 0.64
PCDH17O14917 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH17O14917 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH17O14917 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH17O14917 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH17O14917 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDH17O14917 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PCDH17O14917 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH17O14917 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH17O14917 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH17O14917 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDH17O14917 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH17O14917 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH17O14917 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH17O14917 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH17O14917 ESRRAP1-201ENST00000400596 1257 ntBASIC19.07■□□□□ 0.64
PCDH17O14917 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH17O14917 AC093827.2-201ENST00000512654 315 ntBASIC19.07■□□□□ 0.64
PCDH17O14917 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH17O14917 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.07■□□□□ 0.64
PCDH17O14917 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDH17O14917 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDH17O14917 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDH17O14917 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCDH17O14917 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH17O14917 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH17O14917 FP700111.2-201ENST00000619190 1892 ntBASIC19.07■□□□□ 0.64
PCDH17O14917 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH17O14917 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDH17O14917 AC112907.3-201ENST00000577781 2400 ntBASIC19.06■□□□□ 0.64
PCDH17O14917 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDH17O14917 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDH17O14917 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH17O14917 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms