Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20■□□□□ 0.79
COPEO14579 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
COPEO14579 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.99■□□□□ 0.79
COPEO14579 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.99■□□□□ 0.79
COPEO14579 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.99■□□□□ 0.79
COPEO14579 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.99■□□□□ 0.79
COPEO14579 KRT18P20-201ENST00000548986 1279 ntBASIC19.99■□□□□ 0.79
COPEO14579 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COPEO14579 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.99■□□□□ 0.79
COPEO14579 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COPEO14579 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.99■□□□□ 0.79
COPEO14579 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
COPEO14579 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPEO14579 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.98■□□□□ 0.79
COPEO14579 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
COPEO14579 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
COPEO14579 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPEO14579 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COPEO14579 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.98■□□□□ 0.79
COPEO14579 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COPEO14579 AC120498.9-201ENST00000339021 3867 ntBASIC19.98■□□□□ 0.79
COPEO14579 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COPEO14579 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPEO14579 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.98■□□□□ 0.79
COPEO14579 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.98■□□□□ 0.79
COPEO14579 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.98■□□□□ 0.79
COPEO14579 RBM17P2-201ENST00000616397 1405 ntBASIC19.98■□□□□ 0.79
COPEO14579 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COPEO14579 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.98■□□□□ 0.79
COPEO14579 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPEO14579 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.98■□□□□ 0.79
COPEO14579 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPEO14579 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPEO14579 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPEO14579 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPEO14579 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
COPEO14579 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPEO14579 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.97■□□□□ 0.79
COPEO14579 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COPEO14579 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPEO14579 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPEO14579 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COPEO14579 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPEO14579 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.97■□□□□ 0.79
COPEO14579 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPEO14579 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.97■□□□□ 0.79
COPEO14579 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.97■□□□□ 0.79
COPEO14579 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.97■□□□□ 0.79
COPEO14579 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.97■□□□□ 0.79
COPEO14579 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
COPEO14579 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COPEO14579 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.97■□□□□ 0.79
COPEO14579 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPEO14579 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPEO14579 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
COPEO14579 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPEO14579 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPEO14579 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPEO14579 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPEO14579 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPEO14579 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPEO14579 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.96■□□□□ 0.79
COPEO14579 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPEO14579 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.96■□□□□ 0.79
COPEO14579 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.96■□□□□ 0.79
COPEO14579 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPEO14579 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.96■□□□□ 0.79
COPEO14579 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.96■□□□□ 0.79
COPEO14579 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPEO14579 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.96■□□□□ 0.79
COPEO14579 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPEO14579 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPEO14579 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.96■□□□□ 0.79
COPEO14579 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.96■□□□□ 0.79
COPEO14579 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.96■□□□□ 0.79
COPEO14579 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.96■□□□□ 0.79
COPEO14579 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
COPEO14579 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPEO14579 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPEO14579 AC004408.2-201ENST00000623613 2777 ntBASIC19.95■□□□□ 0.78
COPEO14579 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPEO14579 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPEO14579 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPEO14579 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms