Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.5■■□□□ 1.51
TRIM6-TRIM34B2RNG4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM6-TRIM34B2RNG4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC24.5■■□□□ 1.51
TRIM6-TRIM34B2RNG4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.5■■□□□ 1.51
TRIM6-TRIM34B2RNG4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.5■■□□□ 1.51
TRIM6-TRIM34B2RNG4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM6-TRIM34B2RNG4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM6-TRIM34B2RNG4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.5■■□□□ 1.51
TRIM6-TRIM34B2RNG4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.5■■□□□ 1.51
TRIM6-TRIM34B2RNG4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM6-TRIM34B2RNG4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
TRIM6-TRIM34B2RNG4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM6-TRIM34B2RNG4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM6-TRIM34B2RNG4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 TCF3P1-201ENST00000423021 1937 ntBASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 C2orf69P4-201ENST00000565394 541 ntBASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM6-TRIM34B2RNG4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 NCF1B-203ENST00000435988 1254 ntBASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 PTBP1P-201ENST00000554374 1601 ntBASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.48■■□□□ 1.51
TRIM6-TRIM34B2RNG4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 GPX1P1-201ENST00000388829 606 ntBASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 MIPEPP3-201ENST00000412105 444 ntBASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 AC090192.1-201ENST00000517740 490 ntBASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM6-TRIM34B2RNG4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 BX119927.1-201ENST00000636596 1552 ntBASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 SLC29A4P1-201ENST00000398760 971 ntBASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM6-TRIM34B2RNG4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms