Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 AL353708.3-201ENST00000610272 989 ntBASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.19■□□□□ 0.5
TRAV17A0A0B4J275 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 KRT8P17-201ENST00000453110 1448 ntBASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 MIR1224-201ENST00000408193 85 ntBASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 AC097493.4-201ENST00000641197 219 ntBASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 FEM1AP4-201ENST00000443167 1987 ntBASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV17A0A0B4J275 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV17A0A0B4J275 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 MMP23A-201ENST00000234610 1017 ntBASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 KRT18P21-201ENST00000515767 1272 ntBASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV17A0A0B4J275 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 PLK5-205ENST00000642079 1969 ntBASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV17A0A0B4J275 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.14■□□□□ 0.5
TRAV17A0A0B4J275 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV17A0A0B4J275 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms