Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-3A0A0A0MS03 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRBV5-3A0A0A0MS03 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
TRBV5-3A0A0A0MS03 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 AL031963.3-201ENST00000606441 850 ntBASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV5-3A0A0A0MS03 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 AC100791.3-201ENST00000617619 330 ntBASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 AC013268.1-206ENST00000638368 961 ntBASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 AC112229.1-201ENST00000639295 961 ntBASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.75■□□□□ 0.59
TRBV5-3A0A0A0MS03 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV5-3A0A0A0MS03 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV5-3A0A0A0MS03 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.74■□□□□ 0.59
TRBV5-3A0A0A0MS03 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRBV5-3A0A0A0MS03 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV5-3A0A0A0MS03 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV5-3A0A0A0MS03 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms