Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 AC013268.1-206ENST00000638368 961 ntBASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 AC112229.1-201ENST00000639295 961 ntBASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV30A0A087WSZ9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.71■□□□□ 0.1
TRAV30A0A087WSZ9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV30A0A087WSZ9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV30A0A087WSZ9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.71■□□□□ 0.1
TRAV30A0A087WSZ9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV30A0A087WSZ9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV30A0A087WSZ9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV30A0A087WSZ9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV30A0A087WSZ9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 AC007322.4-201ENST00000509611 723 ntBASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV30A0A087WSZ9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV30A0A087WSZ9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV30A0A087WSZ9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms