Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.05■□□□□ -0
TRAV9-1A0A075B6T8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV9-1A0A075B6T8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.05■□□□□ -0
TRAV9-1A0A075B6T8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.05■□□□□ -0
TRAV9-1A0A075B6T8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.05■□□□□ -0
TRAV9-1A0A075B6T8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 AC137630.3-201ENST00000607245 391 ntBASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.04■□□□□ -0
TRAV9-1A0A075B6T8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 RNF126P1-201ENST00000567452 1320 ntBASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 AC074183.2-201ENST00000623112 922 ntBASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV9-1A0A075B6T8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TRAV9-1A0A075B6T8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV9-1A0A075B6T8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TRAV9-1A0A075B6T8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV9-1A0A075B6T8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV9-1A0A075B6T8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.02■□□□□ -0
TRAV9-1A0A075B6T8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV9-1A0A075B6T8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRAV9-1A0A075B6T8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.02■□□□□ -0
TRAV9-1A0A075B6T8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV9-1A0A075B6T8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV9-1A0A075B6T8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.02■□□□□ -0
TRAV9-1A0A075B6T8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRAV9-1A0A075B6T8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV9-1A0A075B6T8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV9-1A0A075B6T8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRAV9-1A0A075B6T8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV9-1A0A075B6T8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV9-1A0A075B6T8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV9-1A0A075B6T8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV9-1A0A075B6T8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV9-1A0A075B6T8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV9-1A0A075B6T8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV9-1A0A075B6T8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV9-1A0A075B6T8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 MIR2861-201ENST00000636310 90 ntBASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms