Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC018892.2-201ENST00000457656 693 ntBASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AC026407.1-201ENST00000518369 204 ntBASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 UBE2CP4-201ENST00000561405 535 ntBASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AC108451.2-201ENST00000603875 538 ntBASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AC016542.2-201ENST00000624201 619 ntBASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP1Q96SZ6 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 MTCO1P8-201ENST00000416914 1523 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 RN7SKP36-201ENST00000363997 312 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 RN7SKP225-201ENST00000410405 352 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 RPL12P10-201ENST00000413498 498 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 FTOP1-201ENST00000419363 861 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AL390840.1-201ENST00000420303 988 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 RPSAP1-201ENST00000421328 880 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 CLIC4P3-201ENST00000422221 752 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 Z83313.1-201ENST00000433780 718 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 FTH1P7-201ENST00000450676 552 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AP000547.1-201ENST00000454360 617 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 MRPL49P1-201ENST00000505951 535 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AP003117.1-201ENST00000602771 554 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AC025165.5-201ENST00000602802 578 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AC110792.4-201ENST00000609843 298 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AC012653.2-201ENST00000621880 420 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AC104820.1-201ENST00000624183 307 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AC241377.2-202ENST00000636462 997 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AC009166.2-201ENST00000624410 2833 ntBASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP1Q96SZ6 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 THAP12P3-201ENST00000456373 2266 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 AL157713.1-201ENST00000379752 1531 ntBASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP1Q96SZ6 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms