RNA–Protein interactions for RNA: ENST00000612948.4

BROX-209, Transcript of BRO1 domain and CAAX motif containing, humanhuman

TSL 1 (best) BASIC

Gene BROX, Length 4,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BROX-209ENST00000612948 NISCHQ9Y2I1 1504 aa16.45■□□□□ 0.22
BROX-209ENST00000612948 DCAF8L2P0C7V8 631 aa14.75□□□□□ -0.05
BROX-209ENST00000612948 ABCC9O60706 1549 aa14.57□□□□□ -0.08
BROX-209ENST00000612948 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
BROX-209ENST00000612948 RB1CC1Q8TDY2 1594 aa13.83□□□□□ -0.2
BROX-209ENST00000612948 PABPN1Q86U42 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
BROX-209ENST00000612948 NACADO15069 1562 aa13.74□□□□□ -0.21
BROX-209ENST00000612948 ZCCHC6Q5VYS8 1495 aaKnown RBP13.62□□□□□ -0.23
BROX-209ENST00000612948 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
BROX-209ENST00000612948 MYO15BQ96JP2 1530 aa13.46□□□□□ -0.25
BROX-209ENST00000612948 SCRIBQ14160 1630 aa13.44□□□□□ -0.26
BROX-209ENST00000612948 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
BROX-209ENST00000612948 DNAJC5BQ9UF47 199 aa13.17□□□□□ -0.3
BROX-209ENST00000612948 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
BROX-209ENST00000612948 CECR2Q9BXF3 1484 aa13.05□□□□□ -0.32
BROX-209ENST00000612948 BICRAQ9NZM4 1560 aa13.04□□□□□ -0.32
BROX-209ENST00000612948 UNC13AQ9UPW8 1703 aa12.96□□□□□ -0.34
BROX-209ENST00000612948 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
BROX-209ENST00000612948 CC2D2AQ9P2K1 1620 aa12.88□□□□□ -0.35
BROX-209ENST00000612948 BAZ1AQ9NRL2 1556 aaPredicted RBP12.84□□□□□ -0.35
BROX-209ENST00000612948 BAZ1BQ9UIG0 1483 aaKnown RBP12.83□□□□□ -0.36
BROX-209ENST00000612948 SMARCA2P51531 1590 aa12.78□□□□□ -0.36
BROX-209ENST00000612948 ERCC6Q03468 1493 aa12.77□□□□□ -0.37
BROX-209ENST00000612948 ATAD2BQ9ULI0 1458 aa12.74□□□□□ -0.37
BROX-209ENST00000612948 NCAPD3P42695 1498 aa12.7□□□□□ -0.38
BROX-209ENST00000612948 SMARCA4P51532 1647 aa12.69□□□□□ -0.38
BROX-209ENST00000612948 MROH2BQ7Z745 1585 aa12.67□□□□□ -0.38
BROX-209ENST00000612948 RSF1Q96T23 1441 aaPredicted RBP12.64□□□□□ -0.39
BROX-209ENST00000612948 PDS5BQ9NTI5 1447 aa12.59□□□□□ -0.39
BROX-209ENST00000612948 HMGXB3Q12766 1538 aa12.53□□□□□ -0.4
BROX-209ENST00000612948 CADPSQ9ULU8 1353 aa12.53□□□□□ -0.4
BROX-209ENST00000612948 WIZO95785 1651 aa12.48□□□□□ -0.41
BROX-209ENST00000612948 NESP48681 1621 aa12.43□□□□□ -0.42
BROX-209ENST00000612948 FBLN2P98095 1184 aa12.42□□□□□ -0.42
BROX-209ENST00000612948 TOP2AP11388 1531 aaKnown RBP12.41□□□□□ -0.42
BROX-209ENST00000612948 CEP164Q9UPV0 1460 aa12.38□□□□□ -0.43
BROX-209ENST00000612948 PEG3Q9GZU2 1588 aa12.37□□□□□ -0.43
BROX-209ENST00000612948 CCDC88BA6NC98 1476 aa12.36□□□□□ -0.43
BROX-209ENST00000612948 FANCD2Q9BXW9 1451 aa12.35□□□□□ -0.43
BROX-209ENST00000612948 LAMC3Q9Y6N6 1575 aa12.33□□□□□ -0.44
BROX-209ENST00000612948 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
BROX-209ENST00000612948 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.45
BROX-209ENST00000612948 CFTRP13569 1480 aa12.27□□□□□ -0.45
BROX-209ENST00000612948 FAM9AQ8IZU1 332 aaPredicted RBP12.26□□□□□ -0.45
BROX-209ENST00000612948 CUX2O14529 1486 aa12.25□□□□□ -0.45
BROX-209ENST00000612948 CHMP7Q8WUX9 453 aaPredicted RBP12.23□□□□□ -0.45
BROX-209ENST00000612948 ABCC8Q09428 1581 aa12.2□□□□□ -0.46
BROX-209ENST00000612948 OSCARQ8IYS5 282 aa12.18□□□□□ -0.46
BROX-209ENST00000612948 SOGA1O94964 1423 aa12.14□□□□□ -0.47
BROX-209ENST00000612948 EHMT2Q96KQ7 1210 aa12.12□□□□□ -0.47
BROX-209ENST00000612948 WRNQ14191 1432 aaPredicted RBP eCLIP12.12□□□□□ -0.47
BROX-209ENST00000612948 TDRD9Q8NDG6 1382 aaKnown RBP12.11□□□□□ -0.47
BROX-209ENST00000612948 TTBK1Q5TCY1 1321 aaPredicted RBP12.11□□□□□ -0.47
BROX-209ENST00000612948 IFT140Q96RY7 1462 aa12.07□□□□□ -0.48
BROX-209ENST00000612948 TOPBP1Q92547 1522 aa12.05□□□□□ -0.48
BROX-209ENST00000612948 RANGAP1P46060 587 aaPredicted RBP12.05□□□□□ -0.48
BROX-209ENST00000612948 KIF21AQ7Z4S6 1674 aa12.04□□□□□ -0.48
BROX-209ENST00000612948 DNAJC5Q9H3Z4 198 aa12.04□□□□□ -0.48
BROX-209ENST00000612948 URB2Q14146 1524 aaKnown RBP12.03□□□□□ -0.48
BROX-209ENST00000612948 AQRO60306 1485 aaKnown RBP eCLIP12□□□□□ -0.497e-7■■■■□ 26.3
BROX-209ENST00000612948 FGD5Q6ZNL6 1462 aa12□□□□□ -0.49
BROX-209ENST00000612948 RAD54L2Q9Y4B4 1467 aa11.99□□□□□ -0.49
BROX-209ENST00000612948 UBTFP17480 764 aaKnown RBP11.99□□□□□ -0.49
BROX-209ENST00000612948 DNMBPQ6XZF7 1577 aa11.99□□□□□ -0.49
BROX-209ENST00000612948 WDR62O43379 1518 aa11.98□□□□□ -0.49
BROX-209ENST00000612948 NPM1P06748 294 aaKnown RBP eCLIP11.98□□□□□ -0.49
BROX-209ENST00000612948 POLA1P09884 1462 aaPredicted RBP11.96□□□□□ -0.5
BROX-209ENST00000612948 KIF27Q86VH2 1401 aa11.95□□□□□ -0.5
BROX-209ENST00000612948 CYB5RLQ6IPT4 315 aa11.95□□□□□ -0.5
BROX-209ENST00000612948 TRHP20396 242 aaPredicted RBP11.95□□□□□ -0.5
BROX-209ENST00000612948 THOC2Q8NI27 1593 aaKnown RBP11.93□□□□□ -0.5
BROX-209ENST00000612948 GAPVD1Q14C86 1478 aa11.92□□□□□ -0.5
BROX-209ENST00000612948 ATP1B4Q9UN42 357 aaPredicted RBP11.92□□□□□ -0.5
BROX-209ENST00000612948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.91□□□□□ -0.5
BROX-209ENST00000612948 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
BROX-209ENST00000612948 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
BROX-209ENST00000612948 GRIN2BQ13224 1484 aa11.91□□□□□ -0.5
BROX-209ENST00000612948 CUX1P39880 1505 aa11.87□□□□□ -0.51
BROX-209ENST00000612948 CHIC1Q5VXU3 224 aa11.87□□□□□ -0.51
BROX-209ENST00000612948 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
BROX-209ENST00000612948 SNAPC4Q5SXM2 1469 aa11.84□□□□□ -0.51
BROX-209ENST00000612948 CARMIL1Q5VZK9 1371 aa11.83□□□□□ -0.52
BROX-209ENST00000612948 JPH4Q96JJ6 628 aa11.81□□□□□ -0.52
BROX-209ENST00000612948 PRDM2Q13029 1718 aa11.79□□□□□ -0.52
BROX-209ENST00000612948 MAGI1Q96QZ7 1491 aaPredicted RBP11.79□□□□□ -0.52
BROX-209ENST00000612948 FHAD1B1AJZ9 1412 aa11.78□□□□□ -0.52
BROX-209ENST00000612948 P3H3Q8IVL6 736 aa11.78□□□□□ -0.52
BROX-209ENST00000612948 ABCA10Q8WWZ4 1543 aa11.78□□□□□ -0.52
BROX-209ENST00000612948 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
BROX-209ENST00000612948 TOP2BQ02880 1626 aa11.75□□□□□ -0.53
BROX-209ENST00000612948 APLP2Q06481 763 aa11.74□□□□□ -0.53
BROX-209ENST00000612948 SYNJ1O43426 1573 aa11.74□□□□□ -0.53
BROX-209ENST00000612948 CARMIL2Q6F5E8 1435 aa11.74□□□□□ -0.53
BROX-209ENST00000612948 EIF4G3O43432 1585 aaKnown RBP11.73□□□□□ -0.53
BROX-209ENST00000612948 ARID3CA6NKF2 412 aa11.72□□□□□ -0.53
BROX-209ENST00000612948 IGF1RP08069 1367 aa11.72□□□□□ -0.53
BROX-209ENST00000612948 EEA1Q15075 1411 aa11.69□□□□□ -0.54
BROX-209ENST00000612948 GRIN2AQ12879 1464 aa11.66□□□□□ -0.54
BROX-209ENST00000612948 MYT1LQ9UL68 1186 aa11.66□□□□□ -0.54
BROX-209ENST00000612948 RAPGEF2Q9Y4G8 1499 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms