RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 MYT1Q01538 1121 aa13.3□□□□□ -0.28
LIN28B-201ENST00000345080 PELP1Q8IZL8 1130 aaKnown RBP13.23□□□□□ -0.29
LIN28B-201ENST00000345080 DCAF8L2P0C7V8 631 aa13□□□□□ -0.33
LIN28B-201ENST00000345080 NISCHQ9Y2I1 1504 aa12.94□□□□□ -0.34
LIN28B-201ENST00000345080 FAM9AQ8IZU1 332 aaPredicted RBP12.5□□□□□ -0.41
LIN28B-201ENST00000345080 TTBK1Q5TCY1 1321 aaPredicted RBP12.42□□□□□ -0.42
LIN28B-201ENST00000345080 ERICH6Q7L0X2 663 aa12.29□□□□□ -0.44
LIN28B-201ENST00000345080 ZEB1P37275 1124 aaPredicted RBP12.05□□□□□ -0.48
LIN28B-201ENST00000345080 CENPBP07199 599 aaPredicted RBP12.03□□□□□ -0.48
LIN28B-201ENST00000345080 CCER1Q8TC90 406 aaPredicted RBP11.91□□□□□ -0.5
LIN28B-201ENST00000345080 HRCP23327 699 aa11.9□□□□□ -0.5
LIN28B-201ENST00000345080 SUPT5HO00267 1087 aaKnown RBP11.76□□□□□ -0.53
LIN28B-201ENST00000345080 PCGF6Q9BYE7 350 aa11.62□□□□□ -0.55
LIN28B-201ENST00000345080 YTHDC1Q96MU7 727 aaKnown RBP11.59□□□□□ -0.55
LIN28B-201ENST00000345080 SHROOM4Q9ULL8 1493 aa11.56□□□□□ -0.56
LIN28B-201ENST00000345080 RANGAP1P46060 587 aaPredicted RBP11.52□□□□□ -0.57
LIN28B-201ENST00000345080 EIF5BO60841 1220 aaKnown RBP11.48□□□□□ -0.57
LIN28B-201ENST00000345080 APLP2Q06481 763 aa11.46□□□□□ -0.57
LIN28B-201ENST00000345080 NEFLP07196 543 aa11.45□□□□□ -0.58
LIN28B-201ENST00000345080 EHMT2Q96KQ7 1210 aa11.38□□□□□ -0.59
LIN28B-201ENST00000345080 RTL5Q5HYW3 569 aaPredicted RBP11.37□□□□□ -0.59
LIN28B-201ENST00000345080 TRIM26Q12899 539 aaPredicted RBP11.36□□□□□ -0.59
LIN28B-201ENST00000345080 MYT1LQ9UL68 1186 aa11.35□□□□□ -0.59
LIN28B-201ENST00000345080 ABCC9O60706 1549 aa11.35□□□□□ -0.59
LIN28B-201ENST00000345080 CLSPNQ9HAW4 1339 aa11.35□□□□□ -0.59
LIN28B-201ENST00000345080 DAXXQ9UER7 740 aaPredicted RBP11.32□□□□□ -0.6
LIN28B-201ENST00000345080 ACIN1Q9UKV3 1341 aaKnown RBP11.27□□□□□ -0.61
LIN28B-201ENST00000345080 GLIPR1L2Q4G1C9 344 aa11.24□□□□□ -0.61
LIN28B-201ENST00000345080 GTF3C3Q9Y5Q9 886 aa11.2□□□□□ -0.62
LIN28B-201ENST00000345080 PPARGC1BQ86YN6 1023 aaKnown RBP11.14□□□□□ -0.63
LIN28B-201ENST00000345080 CHIC1Q5VXU3 224 aa11.13□□□□□ -0.63
LIN28B-201ENST00000345080 TRIM41Q8WV44 630 aa11.12□□□□□ -0.63
LIN28B-201ENST00000345080 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
LIN28B-201ENST00000345080 SCAF1Q9H7N4 1312 aaKnown RBP11.1□□□□□ -0.63
LIN28B-201ENST00000345080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.08□□□□□ -0.64
LIN28B-201ENST00000345080 HNRNPUL2Q1KMD3 747 aaKnown RBP11.08□□□□□ -0.64
LIN28B-201ENST00000345080 NPM1P06748 294 aaKnown RBP eCLIP11.08□□□□□ -0.64
LIN28B-201ENST00000345080 BCL11AQ9H165 835 aa11.06□□□□□ -0.64
LIN28B-201ENST00000345080 DIEXFQ68CQ4 756 aaKnown RBP11.06□□□□□ -0.64
LIN28B-201ENST00000345080 ZNF316A6NFI3 1004 aaPredicted RBP11.04□□□□□ -0.64
LIN28B-201ENST00000345080 ANP32EQ9BTT0 268 aa11.03□□□□□ -0.64
LIN28B-201ENST00000345080 PABPN1Q86U42 306 aaKnown RBP eCLIP11.03□□□□□ -0.64
LIN28B-201ENST00000345080 DCAF1Q9Y4B6 1507 aa11.03□□□□□ -0.64
LIN28B-201ENST00000345080 ESF1Q9H501 851 aaKnown RBP11.01□□□□□ -0.65
LIN28B-201ENST00000345080 AEBP2Q6ZN18 517 aaPredicted RBP10.96□□□□□ -0.65
LIN28B-201ENST00000345080 FBLN2P98095 1184 aa10.95□□□□□ -0.66
LIN28B-201ENST00000345080 BCANQ96GW7 911 aa10.94□□□□□ -0.66
LIN28B-201ENST00000345080 CCDC180Q9P1Z9 1646 aa10.91□□□□□ -0.66
LIN28B-201ENST00000345080 ZCCHC6Q5VYS8 1495 aaKnown RBP10.9□□□□□ -0.66
LIN28B-201ENST00000345080 AMER1Q5JTC6 1135 aaPredicted RBP10.85□□□□□ -0.67
LIN28B-201ENST00000345080 RB1CC1Q8TDY2 1594 aa10.85□□□□□ -0.67
LIN28B-201ENST00000345080 CDK11AQ9UQ88 783 aaPredicted RBP10.83□□□□□ -0.68
LIN28B-201ENST00000345080 NEUROD1Q13562 356 aa10.82□□□□□ -0.68
LIN28B-201ENST00000345080 ERCC6Q03468 1493 aa10.81□□□□□ -0.68
LIN28B-201ENST00000345080 SLC24A1O60721 1099 aa10.77□□□□□ -0.69
LIN28B-201ENST00000345080 TRHP20396 242 aaPredicted RBP10.76□□□□□ -0.69
LIN28B-201ENST00000345080 UBTFP17480 764 aaKnown RBP10.75□□□□□ -0.69
LIN28B-201ENST00000345080 LOC105371045A0A1W2PR82 267 aa10.74□□□□□ -0.69
LIN28B-201ENST00000345080 ERICH6BQ5W0A0 696 aa10.73□□□□□ -0.69
LIN28B-201ENST00000345080 NBR1Q14596 966 aa10.73□□□□□ -0.69
LIN28B-201ENST00000345080 RTN4Q9NQC3 1192 aaKnown RBP10.72□□□□□ -0.69
LIN28B-201ENST00000345080 POLR3GLQ9BT43 218 aa10.71□□□□□ -0.69
LIN28B-201ENST00000345080 CDK11BP21127 795 aaKnown RBP10.69□□□□□ -0.7
LIN28B-201ENST00000345080 PRKCSHP14314 528 aaPredicted RBP10.68□□□□□ -0.7
LIN28B-201ENST00000345080 CNGB1Q14028 1251 aaPredicted RBP10.67□□□□□ -0.7
LIN28B-201ENST00000345080 ANP32AP39687 249 aaKnown RBP10.66□□□□□ -0.7
LIN28B-201ENST00000345080 ARXQ96QS3 562 aa10.65□□□□□ -0.7
LIN28B-201ENST00000345080 TNNT2P45379 298 aaPredicted RBP10.64□□□□□ -0.71
LIN28B-201ENST00000345080 NPM2Q86SE8 214 aaKnown RBP10.62□□□□□ -0.71
LIN28B-201ENST00000345080 FOXD1Q16676 465 aa10.61□□□□□ -0.71
LIN28B-201ENST00000345080 STAG3Q9UJ98 1225 aa10.57□□□□□ -0.72
LIN28B-201ENST00000345080 CHMP7Q8WUX9 453 aaPredicted RBP10.56□□□□□ -0.72
LIN28B-201ENST00000345080 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.56□□□□□ -0.72
LIN28B-201ENST00000345080 ANP32BQ92688 251 aaKnown RBP10.56□□□□□ -0.72
LIN28B-201ENST00000345080 NACADO15069 1562 aa10.53□□□□□ -0.72
LIN28B-201ENST00000345080 PLPPR3Q6T4P5 718 aa10.51□□□□□ -0.73
LIN28B-201ENST00000345080 A0A0U1RQG5 324 aaPredicted RBP10.5□□□□□ -0.73
LIN28B-201ENST00000345080 ARID4BQ4LE39 1312 aaPredicted RBP10.5□□□□□ -0.73
LIN28B-201ENST00000345080 SCRIBQ14160 1630 aa10.49□□□□□ -0.73
LIN28B-201ENST00000345080 NAP1L5Q96NT1 182 aaPredicted RBP10.48□□□□□ -0.73
LIN28B-201ENST00000345080 EEA1Q15075 1411 aa10.48□□□□□ -0.73
LIN28B-201ENST00000345080 MYO15BQ96JP2 1530 aa10.48□□□□□ -0.73
LIN28B-201ENST00000345080 CSRNP3Q8WYN3 585 aa10.48□□□□□ -0.73
LIN28B-201ENST00000345080 PODXL2Q9NZ53 605 aa10.47□□□□□ -0.73
LIN28B-201ENST00000345080 NCLP19338 710 aaKnown RBP10.47□□□□□ -0.73
LIN28B-201ENST00000345080 SLC4A1APQ9BWU0 796 aaKnown RBP10.47□□□□□ -0.73
LIN28B-201ENST00000345080 DCAF8L1A6NGE4 600 aa10.46□□□□□ -0.73
LIN28B-201ENST00000345080 CCDC136Q96JN2 1154 aa10.46□□□□□ -0.73
LIN28B-201ENST00000345080 ZNF326Q5BKZ1 582 aaKnown RBP10.46□□□□□ -0.74
LIN28B-201ENST00000345080 FKBP8Q14318 412 aa10.45□□□□□ -0.74
LIN28B-201ENST00000345080 ZBTB47Q9UFB7 747 aaPredicted RBP10.45□□□□□ -0.74
LIN28B-201ENST00000345080 DEKP35659 375 aaKnown RBP10.44□□□□□ -0.74
LIN28B-201ENST00000345080 ANP32CO43423 234 aa10.43□□□□□ -0.74
LIN28B-201ENST00000345080 SUPT16HQ9Y5B9 1047 aaKnown RBP10.41□□□□□ -0.74
LIN28B-201ENST00000345080 PPM1GO15355 546 aaPredicted RBP10.4□□□□□ -0.74
LIN28B-201ENST00000345080 DDRGK1Q96HY6 314 aa10.37□□□□□ -0.75
LIN28B-201ENST00000345080 VSIG10Q8N0Z9 540 aa10.36□□□□□ -0.75
LIN28B-201ENST00000345080 TRIM44Q96DX7 344 aaPredicted RBP10.36□□□□□ -0.75
LIN28B-201ENST00000345080 RSPH6AQ9H0K4 717 aa10.36□□□□□ -0.75
LIN28B-201ENST00000345080 NOP58Q9Y2X3 529 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms