RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 AEBP2Q6ZN18 517 aaPredicted RBP24.71■■□□□ 1.55
COPS3-203ENST00000439936 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
COPS3-203ENST00000439936 SENP3Q9H4L4 574 aaPredicted RBP21.32■■□□□ 1
COPS3-203ENST00000439936 PHF23Q9BUL5 403 aaPredicted RBP20.91■□□□□ 0.94
COPS3-203ENST00000439936 FOXD1Q16676 465 aa19.78■□□□□ 0.76
COPS3-203ENST00000439936 MSH5O43196 834 aa18.8■□□□□ 0.6
COPS3-203ENST00000439936 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
COPS3-203ENST00000439936 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
COPS3-203ENST00000439936 PIAS4Q8N2W9 510 aaPredicted RBP18.45■□□□□ 0.54
COPS3-203ENST00000439936 PPP6R1Q9UPN7 881 aa18.18■□□□□ 0.5
COPS3-203ENST00000439936 ADRA2BP18089 450 aa18.12■□□□□ 0.49
COPS3-203ENST00000439936 NISCHQ9Y2I1 1504 aa17.89■□□□□ 0.45
COPS3-203ENST00000439936 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
COPS3-203ENST00000439936 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
COPS3-203ENST00000439936 MAPK8IP2Q13387 824 aaPredicted RBP16.71■□□□□ 0.27
COPS3-203ENST00000439936 CACNB1Q02641 598 aaPredicted RBP16.24■□□□□ 0.19
COPS3-203ENST00000439936 PPP4R3CPQ6ZMV5 832 aa16.15■□□□□ 0.18
COPS3-203ENST00000439936 DCAF8L1A6NGE4 600 aa16.09■□□□□ 0.17
COPS3-203ENST00000439936 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
COPS3-203ENST00000439936 CNKSR2Q8WXI2 1034 aa15.97■□□□□ 0.15
COPS3-203ENST00000439936 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
COPS3-203ENST00000439936 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
COPS3-203ENST00000439936 CCDC180Q9P1Z9 1646 aa15.81■□□□□ 0.12
COPS3-203ENST00000439936 C1QBPQ07021 282 aaKnown RBP15.75■□□□□ 0.11
COPS3-203ENST00000439936 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
COPS3-203ENST00000439936 NCBP3Q53F19 620 aaKnown RBP15.54■□□□□ 0.08
COPS3-203ENST00000439936 ABCC9O60706 1549 aa15.47■□□□□ 0.07
COPS3-203ENST00000439936 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
COPS3-203ENST00000439936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.32■□□□□ 0.04
COPS3-203ENST00000439936 KCNA4P22459 653 aa15.26■□□□□ 0.03
COPS3-203ENST00000439936 DCAF8L2P0C7V8 631 aa15.03■□□□□ -0
COPS3-203ENST00000439936 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
COPS3-203ENST00000439936 NACADO15069 1562 aa14.88□□□□□ -0.03
COPS3-203ENST00000439936 RB1CC1Q8TDY2 1594 aa14.88□□□□□ -0.03
COPS3-203ENST00000439936 ZCCHC6Q5VYS8 1495 aaKnown RBP14.88□□□□□ -0.03
COPS3-203ENST00000439936 MYO15BQ96JP2 1530 aa14.8□□□□□ -0.04
COPS3-203ENST00000439936 CAPN15O75808 1086 aa14.8□□□□□ -0.04
COPS3-203ENST00000439936 DSG3P32926 999 aa14.78□□□□□ -0.04
COPS3-203ENST00000439936 DCAF1Q9Y4B6 1507 aa14.77□□□□□ -0.05
COPS3-203ENST00000439936 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
COPS3-203ENST00000439936 SLC4A2P04920 1241 aa14.71□□□□□ -0.06
COPS3-203ENST00000439936 APLP2Q06481 763 aa14.69□□□□□ -0.06
COPS3-203ENST00000439936 POTEHQ6S545 545 aa14.65□□□□□ -0.06
COPS3-203ENST00000439936 UNC13AQ9UPW8 1703 aa14.57□□□□□ -0.08
COPS3-203ENST00000439936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
COPS3-203ENST00000439936 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
COPS3-203ENST00000439936 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
COPS3-203ENST00000439936 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
COPS3-203ENST00000439936 TRHP20396 242 aaPredicted RBP14.47□□□□□ -0.09
COPS3-203ENST00000439936 SCRIBQ14160 1630 aa14.46□□□□□ -0.09
COPS3-203ENST00000439936 BICRAQ9NZM4 1560 aa14.45□□□□□ -0.1
COPS3-203ENST00000439936 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
COPS3-203ENST00000439936 SLC4A1APQ9BWU0 796 aaKnown RBP14.36□□□□□ -0.11
COPS3-203ENST00000439936 ABCB7O75027 752 aa14.35□□□□□ -0.11
COPS3-203ENST00000439936 RBM42Q9BTD8 480 aaKnown RBP14.25□□□□□ -0.13
COPS3-203ENST00000439936 SHROOM4Q9ULL8 1493 aa14.23□□□□□ -0.13
COPS3-203ENST00000439936 MYCNP04198 464 aaPredicted RBP14.14□□□□□ -0.15
COPS3-203ENST00000439936 ZBTB22O15209 634 aa14.1□□□□□ -0.15
COPS3-203ENST00000439936 FOXD4L1Q9NU39 408 aa14.1□□□□□ -0.15
COPS3-203ENST00000439936 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
COPS3-203ENST00000439936 EIF4G1Q04637 1599 aaKnown RBP14.04□□□□□ -0.16
COPS3-203ENST00000439936 POLA2Q14181 598 aa14.03□□□□□ -0.16
COPS3-203ENST00000439936 CC2D2AQ9P2K1 1620 aa13.98□□□□□ -0.17
COPS3-203ENST00000439936 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
COPS3-203ENST00000439936 CECR2Q9BXF3 1484 aa13.96□□□□□ -0.17
COPS3-203ENST00000439936 CHRDL2Q6WN34 429 aa13.96□□□□□ -0.18
COPS3-203ENST00000439936 CSRNP3Q8WYN3 585 aa13.91□□□□□ -0.18
COPS3-203ENST00000439936 ZBTB12Q9Y330 459 aaPredicted RBP13.87□□□□□ -0.19
COPS3-203ENST00000439936 SMARCA4P51532 1647 aa13.84□□□□□ -0.19
COPS3-203ENST00000439936 BAZ1AQ9NRL2 1556 aaPredicted RBP13.83□□□□□ -0.2
COPS3-203ENST00000439936 AKT1S1Q96B36 256 aa13.81□□□□□ -0.2
COPS3-203ENST00000439936 MROH2BQ7Z745 1585 aa13.8□□□□□ -0.2
COPS3-203ENST00000439936 ATAD2BQ9ULI0 1458 aa13.77□□□□□ -0.21
COPS3-203ENST00000439936 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
COPS3-203ENST00000439936 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
COPS3-203ENST00000439936 PEG3Q9GZU2 1588 aa13.69□□□□□ -0.22
COPS3-203ENST00000439936 RSF1Q96T23 1441 aaPredicted RBP13.68□□□□□ -0.22
COPS3-203ENST00000439936 WIZO95785 1651 aa13.66□□□□□ -0.22
COPS3-203ENST00000439936 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
COPS3-203ENST00000439936 BAZ1BQ9UIG0 1483 aaKnown RBP13.64□□□□□ -0.23
COPS3-203ENST00000439936 ATXN8OSP0DMR3 200 aa13.61□□□□□ -0.23
COPS3-203ENST00000439936 SP7Q8TDD2 431 aaPredicted RBP13.61□□□□□ -0.23
COPS3-203ENST00000439936 REM2Q8IYK8 340 aaPredicted RBP13.6□□□□□ -0.23
COPS3-203ENST00000439936 OSCARQ8IYS5 282 aa13.55□□□□□ -0.24
COPS3-203ENST00000439936 PIP4P2Q8N4L2 257 aa13.52□□□□□ -0.25
COPS3-203ENST00000439936 TOP2AP11388 1531 aaKnown RBP13.47□□□□□ -0.25
COPS3-203ENST00000439936 SUPT5HO00267 1087 aaKnown RBP13.46□□□□□ -0.25
COPS3-203ENST00000439936 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
COPS3-203ENST00000439936 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
COPS3-203ENST00000439936 NESP48681 1621 aa13.42□□□□□ -0.26
COPS3-203ENST00000439936 HAX1O00165 279 aa13.4□□□□□ -0.26
COPS3-203ENST00000439936 CADPSQ9ULU8 1353 aa13.37□□□□□ -0.27
COPS3-203ENST00000439936 CCDC88BA6NC98 1476 aa13.37□□□□□ -0.27
COPS3-203ENST00000439936 LAMC3Q9Y6N6 1575 aa13.35□□□□□ -0.27
COPS3-203ENST00000439936 SPDYE2BA6NHP3 402 aa13.35□□□□□ -0.27
COPS3-203ENST00000439936 SPDYE6P0CI01 402 aa13.35□□□□□ -0.27
COPS3-203ENST00000439936 SPDYE2Q495Y8 402 aa13.35□□□□□ -0.27
COPS3-203ENST00000439936 FBLN2P98095 1184 aa13.34□□□□□ -0.27
COPS3-203ENST00000439936 MKRN4PQ13434 485 aaPredicted RBP13.31□□□□□ -0.28
COPS3-203ENST00000439936 ERCC6Q03468 1493 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms