RNA–Protein interactions for RNA: ENST00000419450.1

LINC01788-201, Transcript of long intergenic non-protein coding RNA 1788, humanhuman

TSL 1 (best) BASIC

Gene LINC01788, Length 2,086 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01788-201ENST00000419450 CHIC1Q5VXU3 224 aa16.07■□□□□ 0.16
LINC01788-201ENST00000419450 AEBP2Q6ZN18 517 aaPredicted RBP15.67■□□□□ 0.1
LINC01788-201ENST00000419450 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
LINC01788-201ENST00000419450 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
LINC01788-201ENST00000419450 MYT1Q01538 1121 aa13.59□□□□□ -0.23
LINC01788-201ENST00000419450 POTEDQ86YR6 584 aa13.55□□□□□ -0.24
LINC01788-201ENST00000419450 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
LINC01788-201ENST00000419450 NISCHQ9Y2I1 1504 aa13.43□□□□□ -0.26
LINC01788-201ENST00000419450 SLC24A1O60721 1099 aa13.4□□□□□ -0.26
LINC01788-201ENST00000419450 TTBK1Q5TCY1 1321 aaPredicted RBP13.26□□□□□ -0.29
LINC01788-201ENST00000419450 SENP3Q9H4L4 574 aaPredicted RBP13.08□□□□□ -0.32
LINC01788-201ENST00000419450 PRKCSHP14314 528 aaPredicted RBP13.06□□□□□ -0.32
LINC01788-201ENST00000419450 HRCP23327 699 aa12.98□□□□□ -0.33
LINC01788-201ENST00000419450 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
LINC01788-201ENST00000419450 APLP2Q06481 763 aa12.85□□□□□ -0.35
LINC01788-201ENST00000419450 ERICH6Q7L0X2 663 aa12.79□□□□□ -0.36
LINC01788-201ENST00000419450 KCNA4P22459 653 aa12.71□□□□□ -0.38
LINC01788-201ENST00000419450 ADRA2BP18089 450 aa12.64□□□□□ -0.39
LINC01788-201ENST00000419450 DAXXQ9UER7 740 aaPredicted RBP12.63□□□□□ -0.39
LINC01788-201ENST00000419450 PPARGC1BQ86YN6 1023 aaKnown RBP12.46□□□□□ -0.41
LINC01788-201ENST00000419450 PCGF6Q9BYE7 350 aa12.39□□□□□ -0.43
LINC01788-201ENST00000419450 SCAF1Q9H7N4 1312 aaKnown RBP12.39□□□□□ -0.43
LINC01788-201ENST00000419450 PPP6R1Q9UPN7 881 aa12.36□□□□□ -0.43
LINC01788-201ENST00000419450 BCL11AQ9H165 835 aa12.35□□□□□ -0.43
LINC01788-201ENST00000419450 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
LINC01788-201ENST00000419450 MYO15BQ96JP2 1530 aa12.29□□□□□ -0.44
LINC01788-201ENST00000419450 DCAF1Q9Y4B6 1507 aa12.27□□□□□ -0.44
LINC01788-201ENST00000419450 CCDC180Q9P1Z9 1646 aa12.25□□□□□ -0.45
LINC01788-201ENST00000419450 ZEB1P37275 1124 aaPredicted RBP12.22□□□□□ -0.45
LINC01788-201ENST00000419450 SLC4A1APQ9BWU0 796 aaKnown RBP12.22□□□□□ -0.45
LINC01788-201ENST00000419450 FAM9AQ8IZU1 332 aaPredicted RBP12.17□□□□□ -0.46
LINC01788-201ENST00000419450 FOXD1Q16676 465 aa12.09□□□□□ -0.47
LINC01788-201ENST00000419450 EIF5BO60841 1220 aaKnown RBP12.09□□□□□ -0.47
LINC01788-201ENST00000419450 TRIM26Q12899 539 aaPredicted RBP12.07□□□□□ -0.48
LINC01788-201ENST00000419450 ACIN1Q9UKV3 1341 aaKnown RBP12.06□□□□□ -0.48
LINC01788-201ENST00000419450 SUPT5HO00267 1087 aaKnown RBP11.96□□□□□ -0.49
LINC01788-201ENST00000419450 PPP4R3CPQ6ZMV5 832 aa11.96□□□□□ -0.5
LINC01788-201ENST00000419450 CENPBP07199 599 aaPredicted RBP11.95□□□□□ -0.5
LINC01788-201ENST00000419450 NEUROD1Q13562 356 aa11.91□□□□□ -0.5
LINC01788-201ENST00000419450 GTF3C3Q9Y5Q9 886 aa11.91□□□□□ -0.5
LINC01788-201ENST00000419450 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
LINC01788-201ENST00000419450 SHROOM4Q9ULL8 1493 aa11.85□□□□□ -0.51
LINC01788-201ENST00000419450 PLEKHG5O94827 1062 aa11.82□□□□□ -0.52
LINC01788-201ENST00000419450 NPM3O75607 178 aaKnown RBP11.74□□□□□ -0.53
LINC01788-201ENST00000419450 ZBTB22O15209 634 aa11.72□□□□□ -0.53
LINC01788-201ENST00000419450 MSH5O43196 834 aa11.72□□□□□ -0.53
LINC01788-201ENST00000419450 RTN4Q9NQC3 1192 aaKnown RBP11.66□□□□□ -0.54
LINC01788-201ENST00000419450 LOC105371045A0A1W2PR82 267 aa11.64□□□□□ -0.55
LINC01788-201ENST00000419450 DIEXFQ68CQ4 756 aaKnown RBP11.63□□□□□ -0.55
LINC01788-201ENST00000419450 PIAS4Q8N2W9 510 aaPredicted RBP11.63□□□□□ -0.55
LINC01788-201ENST00000419450 ANP32EQ9BTT0 268 aa11.61□□□□□ -0.55
LINC01788-201ENST00000419450 ARXQ96QS3 562 aa11.58□□□□□ -0.56
LINC01788-201ENST00000419450 AMER1Q5JTC6 1135 aaPredicted RBP11.57□□□□□ -0.56
LINC01788-201ENST00000419450 UBE2Q2Q8WVN8 375 aa11.57□□□□□ -0.56
LINC01788-201ENST00000419450 PODXL2Q9NZ53 605 aa11.56□□□□□ -0.56
LINC01788-201ENST00000419450 CLSPNQ9HAW4 1339 aa11.55□□□□□ -0.56
LINC01788-201ENST00000419450 ZCCHC6Q5VYS8 1495 aaKnown RBP11.53□□□□□ -0.56
LINC01788-201ENST00000419450 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
LINC01788-201ENST00000419450 RANGAP1P46060 587 aaPredicted RBP11.5□□□□□ -0.57
LINC01788-201ENST00000419450 TRIM41Q8WV44 630 aa11.45□□□□□ -0.58
LINC01788-201ENST00000419450 TIMELESSQ9UNS1 1208 aa11.45□□□□□ -0.58
LINC01788-201ENST00000419450 CCER1Q8TC90 406 aaPredicted RBP11.42□□□□□ -0.58
LINC01788-201ENST00000419450 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.58
LINC01788-201ENST00000419450 FOXD4L1Q9NU39 408 aa11.39□□□□□ -0.59
LINC01788-201ENST00000419450 ANO8Q9HCE9 1232 aaPredicted RBP11.36□□□□□ -0.59
LINC01788-201ENST00000419450 ZNF316A6NFI3 1004 aaPredicted RBP11.36□□□□□ -0.59
LINC01788-201ENST00000419450 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.34□□□□□ -0.59
LINC01788-201ENST00000419450 YTHDC1Q96MU7 727 aaKnown RBP11.34□□□□□ -0.59
LINC01788-201ENST00000419450 TSHZ2Q9NRE2 1034 aa11.33□□□□□ -0.6
LINC01788-201ENST00000419450 PKNOX2Q96KN3 472 aa11.32□□□□□ -0.6
LINC01788-201ENST00000419450 SUPT16HQ9Y5B9 1047 aaKnown RBP11.29□□□□□ -0.6
LINC01788-201ENST00000419450 MIER1Q8N108 512 aa11.23□□□□□ -0.61
LINC01788-201ENST00000419450 PDIA4P13667 645 aaKnown RBP11.21□□□□□ -0.61
LINC01788-201ENST00000419450 TULP1O00294 542 aaPredicted RBP11.2□□□□□ -0.62
LINC01788-201ENST00000419450 MYT1LQ9UL68 1186 aa11.18□□□□□ -0.62
LINC01788-201ENST00000419450 HOMEZQ8IX15 550 aa11.17□□□□□ -0.62
LINC01788-201ENST00000419450 DNAJC5BQ9UF47 199 aa11.16□□□□□ -0.62
LINC01788-201ENST00000419450 PDE4CQ08493 712 aa11.13□□□□□ -0.63
LINC01788-201ENST00000419450 NEFLP07196 543 aa11.12□□□□□ -0.63
LINC01788-201ENST00000419450 FKBP8Q14318 412 aa11.1□□□□□ -0.63
LINC01788-201ENST00000419450 WRNQ14191 1432 aaPredicted RBP eCLIP11.08□□□□□ -0.64
LINC01788-201ENST00000419450 ABCC9O60706 1549 aa11.07□□□□□ -0.64
LINC01788-201ENST00000419450 RBM19Q9Y4C8 960 aaKnown RBP11.03□□□□□ -0.64
LINC01788-201ENST00000419450 SALL2Q9Y467 1007 aaPredicted RBP11.02□□□□□ -0.65
LINC01788-201ENST00000419450 ERICH6BQ5W0A0 696 aa11.01□□□□□ -0.65
LINC01788-201ENST00000419450 MAPK8IP2Q13387 824 aaPredicted RBP11□□□□□ -0.65
LINC01788-201ENST00000419450 FANCIQ9NVI1 1328 aa10.98□□□□□ -0.65
LINC01788-201ENST00000419450 RNF216Q9NWF9 866 aaPredicted RBP10.97□□□□□ -0.65
LINC01788-201ENST00000419450 CCDC136Q96JN2 1154 aa10.97□□□□□ -0.65
LINC01788-201ENST00000419450 RB1CC1Q8TDY2 1594 aa10.96□□□□□ -0.65
LINC01788-201ENST00000419450 FGD1P98174 961 aa10.94□□□□□ -0.66
LINC01788-201ENST00000419450 BCL11BQ9C0K0 894 aaPredicted RBP10.94□□□□□ -0.66
LINC01788-201ENST00000419450 NPM2Q86SE8 214 aaKnown RBP10.93□□□□□ -0.66
LINC01788-201ENST00000419450 TAF7LQ5H9L4 462 aa10.91□□□□□ -0.66
LINC01788-201ENST00000419450 DEKP35659 375 aaKnown RBP10.9□□□□□ -0.66
LINC01788-201ENST00000419450 SLC4A2P04920 1241 aa10.89□□□□□ -0.67
LINC01788-201ENST00000419450 TAOK2Q9UL54 1235 aa10.89□□□□□ -0.67
LINC01788-201ENST00000419450 RSF1Q96T23 1441 aaPredicted RBP10.87□□□□□ -0.67
LINC01788-201ENST00000419450 ATXN8OSP0DMR3 200 aa10.86□□□□□ -0.67
LINC01788-201ENST00000419450 BCANQ96GW7 911 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms