RNA–Protein interactions for RNA: ENST00000457628.1

LINC01053-201, Transcript of long intergenic non-protein coding RNA 1053, humanhuman

TSL 2 BASIC

Gene LINC01053, Length 771 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01053-201ENST00000457628 AEBP2Q6ZN18 517 aaPredicted RBP23.59■■□□□ 1.37
LINC01053-201ENST00000457628 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
LINC01053-201ENST00000457628 PHF23Q9BUL5 403 aaPredicted RBP20.26■□□□□ 0.83
LINC01053-201ENST00000457628 SENP3Q9H4L4 574 aaPredicted RBP19.97■□□□□ 0.79
LINC01053-201ENST00000457628 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
LINC01053-201ENST00000457628 FOXD1Q16676 465 aa18.57■□□□□ 0.56
LINC01053-201ENST00000457628 NISCHQ9Y2I1 1504 aa18.29■□□□□ 0.52
LINC01053-201ENST00000457628 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
LINC01053-201ENST00000457628 ADRA2BP18089 450 aa17.86■□□□□ 0.45
LINC01053-201ENST00000457628 PIAS4Q8N2W9 510 aaPredicted RBP17.5■□□□□ 0.39
LINC01053-201ENST00000457628 ABCC9O60706 1549 aa17.21■□□□□ 0.34
LINC01053-201ENST00000457628 MSH5O43196 834 aa17.08■□□□□ 0.32
LINC01053-201ENST00000457628 CCDC180Q9P1Z9 1646 aa16.76■□□□□ 0.27
LINC01053-201ENST00000457628 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
LINC01053-201ENST00000457628 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
LINC01053-201ENST00000457628 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
LINC01053-201ENST00000457628 RB1CC1Q8TDY2 1594 aa16.22■□□□□ 0.19
LINC01053-201ENST00000457628 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
LINC01053-201ENST00000457628 KCNA4P22459 653 aa16.08■□□□□ 0.16
LINC01053-201ENST00000457628 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
LINC01053-201ENST00000457628 CNKSR2Q8WXI2 1034 aa15.99■□□□□ 0.15
LINC01053-201ENST00000457628 NACADO15069 1562 aa15.97■□□□□ 0.15
LINC01053-201ENST00000457628 DMRT2Q9Y5R5 561 aa15.95■□□□□ 0.14
LINC01053-201ENST00000457628 PABPN1Q86U42 306 aaKnown RBP eCLIP15.92■□□□□ 0.14
LINC01053-201ENST00000457628 UNC13AQ9UPW8 1703 aa15.88■□□□□ 0.13
LINC01053-201ENST00000457628 DNAJC5Q9H3Z4 198 aa15.81■□□□□ 0.12
LINC01053-201ENST00000457628 NPM3O75607 178 aaKnown RBP15.8■□□□□ 0.12
LINC01053-201ENST00000457628 DCAF8L2P0C7V8 631 aa15.73■□□□□ 0.11
LINC01053-201ENST00000457628 BICRAQ9NZM4 1560 aa15.68■□□□□ 0.1
LINC01053-201ENST00000457628 RNF216Q9NWF9 866 aaPredicted RBP15.66■□□□□ 0.1
LINC01053-201ENST00000457628 HOXD11P31277 338 aaPredicted RBP15.62■□□□□ 0.09
LINC01053-201ENST00000457628 POTEDQ86YR6 584 aa15.62■□□□□ 0.09
LINC01053-201ENST00000457628 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
LINC01053-201ENST00000457628 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
LINC01053-201ENST00000457628 MYO15BQ96JP2 1530 aa15.55■□□□□ 0.08
LINC01053-201ENST00000457628 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
LINC01053-201ENST00000457628 EIF4G1Q04637 1599 aaKnown RBP15.37■□□□□ 0.05
LINC01053-201ENST00000457628 SLC4A1APQ9BWU0 796 aaKnown RBP15.3■□□□□ 0.04
LINC01053-201ENST00000457628 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
LINC01053-201ENST00000457628 CUX2O14529 1486 aa15.14■□□□□ 0.01
LINC01053-201ENST00000457628 DCAF1Q9Y4B6 1507 aa15.12■□□□□ 0.01
LINC01053-201ENST00000457628 SCRIBQ14160 1630 aa15.12■□□□□ 0.01
LINC01053-201ENST00000457628 ZCCHC6Q5VYS8 1495 aaKnown RBP15□□□□□ -0.01
LINC01053-201ENST00000457628 ERCC6Q03468 1493 aa14.95□□□□□ -0.02
LINC01053-201ENST00000457628 SLC4A2P04920 1241 aa14.93□□□□□ -0.02
LINC01053-201ENST00000457628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.88□□□□□ -0.03
LINC01053-201ENST00000457628 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
LINC01053-201ENST00000457628 TRIM41Q8WV44 630 aa14.83□□□□□ -0.04
LINC01053-201ENST00000457628 ZBTB22O15209 634 aa14.81□□□□□ -0.04
LINC01053-201ENST00000457628 FOXD4L1Q9NU39 408 aa14.78□□□□□ -0.04
LINC01053-201ENST00000457628 NCAPD3P42695 1498 aa14.71□□□□□ -0.05
LINC01053-201ENST00000457628 CSRNP3Q8WYN3 585 aa14.71□□□□□ -0.05
LINC01053-201ENST00000457628 RNF39Q9H2S5 420 aa14.67□□□□□ -0.06
LINC01053-201ENST00000457628 U3KPZ7 1027 aaPredicted RBP14.67□□□□□ -0.06
LINC01053-201ENST00000457628 THOC2Q8NI27 1593 aaKnown RBP14.6□□□□□ -0.07
LINC01053-201ENST00000457628 NESP48681 1621 aa14.59□□□□□ -0.07
LINC01053-201ENST00000457628 MYCNP04198 464 aaPredicted RBP14.57□□□□□ -0.08
LINC01053-201ENST00000457628 ATAD2BQ9ULI0 1458 aa14.55□□□□□ -0.08
LINC01053-201ENST00000457628 HMGXB3Q12766 1538 aa14.54□□□□□ -0.08
LINC01053-201ENST00000457628 SMARCA2P51531 1590 aa14.54□□□□□ -0.08
LINC01053-201ENST00000457628 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
LINC01053-201ENST00000457628 KIF21AQ7Z4S6 1674 aa14.47□□□□□ -0.09
LINC01053-201ENST00000457628 C1QBPQ07021 282 aaKnown RBP14.47□□□□□ -0.09
LINC01053-201ENST00000457628 PDS5BQ9NTI5 1447 aa14.44□□□□□ -0.1
LINC01053-201ENST00000457628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
LINC01053-201ENST00000457628 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
LINC01053-201ENST00000457628 SMARCA4P51532 1647 aa14.41□□□□□ -0.1
LINC01053-201ENST00000457628 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
LINC01053-201ENST00000457628 BAZ1BQ9UIG0 1483 aaKnown RBP14.39□□□□□ -0.11
LINC01053-201ENST00000457628 SAMD1Q6SPF0 538 aaPredicted RBP14.38□□□□□ -0.11
LINC01053-201ENST00000457628 BAZ1AQ9NRL2 1556 aaPredicted RBP14.37□□□□□ -0.11
LINC01053-201ENST00000457628 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
LINC01053-201ENST00000457628 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
LINC01053-201ENST00000457628 WDR62O43379 1518 aa14.29□□□□□ -0.12
LINC01053-201ENST00000457628 PEG3Q9GZU2 1588 aa14.28□□□□□ -0.12
LINC01053-201ENST00000457628 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
LINC01053-201ENST00000457628 APLP2Q06481 763 aa14.26□□□□□ -0.13
LINC01053-201ENST00000457628 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
LINC01053-201ENST00000457628 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
LINC01053-201ENST00000457628 ATF5Q9Y2D1 282 aaPredicted RBP14.23□□□□□ -0.13
LINC01053-201ENST00000457628 RIMBP3CA6NJZ7 1639 aa14.22□□□□□ -0.13
LINC01053-201ENST00000457628 RIMBP3BA6NNM3 1639 aa14.22□□□□□ -0.13
LINC01053-201ENST00000457628 RIMBP3Q9UFD9 1639 aa14.22□□□□□ -0.13
LINC01053-201ENST00000457628 CAPN15O75808 1086 aa14.19□□□□□ -0.14
LINC01053-201ENST00000457628 CEP164Q9UPV0 1460 aa14.13□□□□□ -0.15
LINC01053-201ENST00000457628 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
LINC01053-201ENST00000457628 ZNF219Q9P2Y4 722 aaPredicted RBP14.09□□□□□ -0.15
LINC01053-201ENST00000457628 ARHGEF11O15085 1522 aa14.08□□□□□ -0.16
LINC01053-201ENST00000457628 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
LINC01053-201ENST00000457628 FANCD2Q9BXW9 1451 aa14.05□□□□□ -0.16
LINC01053-201ENST00000457628 MROH2BQ7Z745 1585 aa14.05□□□□□ -0.16
LINC01053-201ENST00000457628 DSG3P32926 999 aa13.96□□□□□ -0.17
LINC01053-201ENST00000457628 ABCB7O75027 752 aa13.94□□□□□ -0.18
LINC01053-201ENST00000457628 URB2Q14146 1524 aaKnown RBP13.94□□□□□ -0.18
LINC01053-201ENST00000457628 CFTRP13569 1480 aa13.93□□□□□ -0.18
LINC01053-201ENST00000457628 POLA2Q14181 598 aa13.9□□□□□ -0.18
LINC01053-201ENST00000457628 WIZO95785 1651 aa13.9□□□□□ -0.18
LINC01053-201ENST00000457628 IFT140Q96RY7 1462 aa13.89□□□□□ -0.19
LINC01053-201ENST00000457628 PRDM2Q13029 1718 aa13.88□□□□□ -0.19
LINC01053-201ENST00000457628 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms