RNA–Protein interactions for RNA: ENST00000539313.1

AC027544.2-201, humanhuman

TSL 5 BASIC

Gene AC027544.2, Length 630 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027544.2-201ENST00000539313 AEBP2Q6ZN18 517 aaPredicted RBP31.43■■■□□ 2.62
AC027544.2-201ENST00000539313 CHIC1Q5VXU3 224 aa30.67■■■□□ 2.5
AC027544.2-201ENST00000539313 PHF23Q9BUL5 403 aaPredicted RBP26.89■■□□□ 1.9
AC027544.2-201ENST00000539313 SENP3Q9H4L4 574 aaPredicted RBP26.82■■□□□ 1.88
AC027544.2-201ENST00000539313 PLPPR3Q6T4P5 718 aa24.92■■□□□ 1.58
AC027544.2-201ENST00000539313 FOXD1Q16676 465 aa24.82■■□□□ 1.56
AC027544.2-201ENST00000539313 ADRA2BP18089 450 aa23.78■■□□□ 1.4
AC027544.2-201ENST00000539313 PPP6R1Q9UPN7 881 aa23.76■■□□□ 1.39
AC027544.2-201ENST00000539313 PIAS4Q8N2W9 510 aaPredicted RBP23.44■■□□□ 1.34
AC027544.2-201ENST00000539313 MSH5O43196 834 aa23.03■■□□□ 1.28
AC027544.2-201ENST00000539313 PPP4R3CPQ6ZMV5 832 aa21.91■■□□□ 1.1
AC027544.2-201ENST00000539313 SCAF1Q9H7N4 1312 aaKnown RBP21.89■■□□□ 1.1
AC027544.2-201ENST00000539313 MAPK8IP2Q13387 824 aaPredicted RBP21.59■■□□□ 1.05
AC027544.2-201ENST00000539313 NCBP3Q53F19 620 aaKnown RBP21.4■■□□□ 1.02
AC027544.2-201ENST00000539313 CNKSR2Q8WXI2 1034 aa21.35■■□□□ 1.01
AC027544.2-201ENST00000539313 DMRT2Q9Y5R5 561 aa21.35■■□□□ 1.01
AC027544.2-201ENST00000539313 KCNA4P22459 653 aa21.24■□□□□ 0.99
AC027544.2-201ENST00000539313 POTEDQ86YR6 584 aa21.08■□□□□ 0.97
AC027544.2-201ENST00000539313 NPM3O75607 178 aaKnown RBP20.96■□□□□ 0.95
AC027544.2-201ENST00000539313 RNF216Q9NWF9 866 aaPredicted RBP20.94■□□□□ 0.94
AC027544.2-201ENST00000539313 HOXD11P31277 338 aaPredicted RBP20.85■□□□□ 0.93
AC027544.2-201ENST00000539313 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
AC027544.2-201ENST00000539313 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
AC027544.2-201ENST00000539313 SLC4A1APQ9BWU0 796 aaKnown RBP20.27■□□□□ 0.84
AC027544.2-201ENST00000539313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.96■□□□□ 0.79
AC027544.2-201ENST00000539313 SLC4A2P04920 1241 aa19.79■□□□□ 0.76
AC027544.2-201ENST00000539313 RNF39Q9H2S5 420 aa19.66■□□□□ 0.74
AC027544.2-201ENST00000539313 FOXD4L1Q9NU39 408 aa19.64■□□□□ 0.73
AC027544.2-201ENST00000539313 EHMT2Q96KQ7 1210 aa19.55■□□□□ 0.72
AC027544.2-201ENST00000539313 U3KPZ7 1027 aaPredicted RBP19.53■□□□□ 0.72
AC027544.2-201ENST00000539313 ZBTB22O15209 634 aa19.48■□□□□ 0.71
AC027544.2-201ENST00000539313 C1QBPQ07021 282 aaKnown RBP19.48■□□□□ 0.71
AC027544.2-201ENST00000539313 MYCNP04198 464 aaPredicted RBP19.43■□□□□ 0.7
AC027544.2-201ENST00000539313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.39■□□□□ 0.69
AC027544.2-201ENST00000539313 HNRNPUL2Q1KMD3 747 aaKnown RBP19.39■□□□□ 0.69
AC027544.2-201ENST00000539313 CSRNP3Q8WYN3 585 aa19.33■□□□□ 0.68
AC027544.2-201ENST00000539313 CACNB1Q02641 598 aaPredicted RBP19.3■□□□□ 0.68
AC027544.2-201ENST00000539313 SAMD1Q6SPF0 538 aaPredicted RBP19.28■□□□□ 0.68
AC027544.2-201ENST00000539313 APLP2Q06481 763 aa19.24■□□□□ 0.67
AC027544.2-201ENST00000539313 CAPN15O75808 1086 aa19.03■□□□□ 0.64
AC027544.2-201ENST00000539313 SPINK5Q9NQ38 1064 aaPredicted RBP19.01■□□□□ 0.63
AC027544.2-201ENST00000539313 ATXN8OSP0DMR3 200 aa18.98■□□□□ 0.63
AC027544.2-201ENST00000539313 ZNF219Q9P2Y4 722 aaPredicted RBP18.92■□□□□ 0.62
AC027544.2-201ENST00000539313 TRHP20396 242 aaPredicted RBP18.9■□□□□ 0.62
AC027544.2-201ENST00000539313 ATF5Q9Y2D1 282 aaPredicted RBP18.81■□□□□ 0.6
AC027544.2-201ENST00000539313 DSG3P32926 999 aa18.67■□□□□ 0.58
AC027544.2-201ENST00000539313 ABCB7O75027 752 aa18.6■□□□□ 0.57
AC027544.2-201ENST00000539313 POLA2Q14181 598 aa18.55■□□□□ 0.56
AC027544.2-201ENST00000539313 ZBTB12Q9Y330 459 aaPredicted RBP18.31■□□□□ 0.52
AC027544.2-201ENST00000539313 FBLN2P98095 1184 aa18.2■□□□□ 0.5
AC027544.2-201ENST00000539313 MKRN4PQ13434 485 aaPredicted RBP17.99■□□□□ 0.47
AC027544.2-201ENST00000539313 OSCARQ8IYS5 282 aa17.91■□□□□ 0.46
AC027544.2-201ENST00000539313 RBM42Q9BTD8 480 aaKnown RBP17.9■□□□□ 0.46
AC027544.2-201ENST00000539313 SPDYE2BA6NHP3 402 aa17.77■□□□□ 0.44
AC027544.2-201ENST00000539313 SPDYE6P0CI01 402 aa17.77■□□□□ 0.44
AC027544.2-201ENST00000539313 SPDYE2Q495Y8 402 aa17.77■□□□□ 0.44
AC027544.2-201ENST00000539313 ZNF692Q9BU19 519 aaPredicted RBP17.69■□□□□ 0.42
AC027544.2-201ENST00000539313 SPDYE4A6NLX3 237 aa17.64■□□□□ 0.41
AC027544.2-201ENST00000539313 AKT1S1Q96B36 256 aa17.61■□□□□ 0.41
AC027544.2-201ENST00000539313 SSUH2Q9Y2M2 353 aa17.56■□□□□ 0.4
AC027544.2-201ENST00000539313 FKBP8Q14318 412 aa17.54■□□□□ 0.4
AC027544.2-201ENST00000539313 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
AC027544.2-201ENST00000539313 REM2Q8IYK8 340 aaPredicted RBP17.41■□□□□ 0.38
AC027544.2-201ENST00000539313 SPDYE1Q8NFV5 336 aaPredicted RBP17.29■□□□□ 0.36
AC027544.2-201ENST00000539313 PROM2Q8N271 834 aa17.25■□□□□ 0.35
AC027544.2-201ENST00000539313 CLEC11AQ9Y240 323 aa17.21■□□□□ 0.35
AC027544.2-201ENST00000539313 PITPNM1O00562 1244 aa17.19■□□□□ 0.34
AC027544.2-201ENST00000539313 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
AC027544.2-201ENST00000539313 CHRDL2Q6WN34 429 aa17.14■□□□□ 0.33
AC027544.2-201ENST00000539313 PRR29P0C7W0 189 aa17.06■□□□□ 0.32
AC027544.2-201ENST00000539313 FBXO3Q9UK99 471 aa17.03■□□□□ 0.32
AC027544.2-201ENST00000539313 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
AC027544.2-201ENST00000539313 PIP4P2Q8N4L2 257 aa16.87■□□□□ 0.29
AC027544.2-201ENST00000539313 PLEKHG5O94827 1062 aa16.79■□□□□ 0.28
AC027544.2-201ENST00000539313 PRKAR2AP13861 404 aaKnown RBP16.79■□□□□ 0.28
AC027544.2-201ENST00000539313 MIER1Q8N108 512 aa16.77■□□□□ 0.28
AC027544.2-201ENST00000539313 PLCD3Q8N3E9 789 aa16.75■□□□□ 0.27
AC027544.2-201ENST00000539313 CHADLQ6NUI6 762 aa16.73■□□□□ 0.27
AC027544.2-201ENST00000539313 CREBZFQ9NS37 354 aa16.72■□□□□ 0.27
AC027544.2-201ENST00000539313 VASPP50552 380 aaPredicted RBP16.71■□□□□ 0.27
AC027544.2-201ENST00000539313 POTEHQ6S545 545 aa16.71■□□□□ 0.27
AC027544.2-201ENST00000539313 ZBTB47Q9UFB7 747 aaPredicted RBP16.61■□□□□ 0.25
AC027544.2-201ENST00000539313 FARP1Q9Y4F1 1045 aaPredicted RBP16.6■□□□□ 0.25
AC027544.2-201ENST00000539313 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
AC027544.2-201ENST00000539313 KLHL34Q8N239 644 aa16.53■□□□□ 0.24
AC027544.2-201ENST00000539313 MNX1P50219 401 aaPredicted RBP16.49■□□□□ 0.23
AC027544.2-201ENST00000539313 IFNLR1Q8IU57 520 aaPredicted RBP16.44■□□□□ 0.22
AC027544.2-201ENST00000539313 HAX1O00165 279 aa16.42■□□□□ 0.22
AC027544.2-201ENST00000539313 SPOCK2Q92563 424 aa16.34■□□□□ 0.21
AC027544.2-201ENST00000539313 PAK3O75914 559 aaPredicted RBP16.33■□□□□ 0.2
AC027544.2-201ENST00000539313 C19orf67A6NJJ6 358 aa16.32■□□□□ 0.2
AC027544.2-201ENST00000539313 CD44P16070 742 aaKnown RBP16.31■□□□□ 0.2
AC027544.2-201ENST00000539313 NUBP1P53384 320 aa16.27■□□□□ 0.2
AC027544.2-201ENST00000539313 FAM212AQ96EL1 285 aa16.24■□□□□ 0.19
AC027544.2-201ENST00000539313 RASEFQ8IZ41 740 aa16.23■□□□□ 0.19
AC027544.2-201ENST00000539313 TSPYL2Q9H2G4 693 aaPredicted RBP16.22■□□□□ 0.19
AC027544.2-201ENST00000539313 ZRANB1Q9UGI0 708 aa16.22■□□□□ 0.19
AC027544.2-201ENST00000539313 DCAF8Q5TAQ9 597 aa16.19■□□□□ 0.18
AC027544.2-201ENST00000539313 GSE1Q14687 1217 aa16.16■□□□□ 0.18
AC027544.2-201ENST00000539313 EVX2Q03828 476 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms