Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.282e-7■■□□□ 11.4
PRPF8Q6P2Q9 NACA-207ENST00000546917 299 ntTSL 26.89□□□□□ -1.314e-16■■□□□ 11.4
PRPF8Q6P2Q9 RNPEP-214ENST00000620670 683 ntTSL 36.76□□□□□ -1.332e-9■■□□□ 11.4
PRPF8Q6P2Q9 ATP2C1-215ENST00000508660 943 ntTSL 56.75□□□□□ -1.332e-7■■□□□ 11.4
PRPF8Q6P2Q9 NPEPPS-203ENST00000525021 735 ntTSL 56.66□□□□□ -1.342e-7■■□□□ 11.4
PRPF8Q6P2Q9 NPEPPS-219ENST00000533538 1281 ntTSL 26.66□□□□□ -1.342e-7■■□□□ 11.4
PRPF8Q6P2Q9 C17orf80-209ENST00000585109 542 ntAPPRIS ALT2 TSL 46.59□□□□□ -1.362e-7■■□□□ 11.4
PRPF8Q6P2Q9 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.57□□□□□ -1.362e-7■■□□□ 11.4
PRPF8Q6P2Q9 AGO2-202ENST00000517293 422 ntTSL 36.54□□□□□ -1.362e-7■■□□□ 11.4
PRPF8Q6P2Q9 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.47□□□□□ -1.372e-7■■□□□ 11.4
PRPF8Q6P2Q9 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.392e-7■■□□□ 11.4
PRPF8Q6P2Q9 ZFYVE26-206ENST00000554783 872 ntTSL 36.18□□□□□ -1.422e-7■■□□□ 11.4
PRPF8Q6P2Q9 AAED1-202ENST00000411939 2514 ntTSL 35.98□□□□□ -1.452e-7■■□□□ 11.4
PRPF8Q6P2Q9 NEK8-204ENST00000579671 643 ntTSL 35.96□□□□□ -1.462e-7■■□□□ 11.4
PRPF8Q6P2Q9 RNF121-205ENST00000525176 328 ntTSL 35.8□□□□□ -1.482e-7■■□□□ 11.4
PRPF8Q6P2Q9 DNAJB4-206ENST00000487931 949 ntTSL 25.72□□□□□ -1.492e-7■■□□□ 11.4
PRPF8Q6P2Q9 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC5.62□□□□□ -1.512e-7■■□□□ 11.4
PRPF8Q6P2Q9 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.522e-7■■□□□ 11.4
PRPF8Q6P2Q9 LAMB1-208ENST00000470995 449 ntTSL 35.35□□□□□ -1.552e-6■■□□□ 11.4
PRPF8Q6P2Q9 NEK8-208ENST00000593261 547 ntTSL 35.3□□□□□ -1.562e-7■■□□□ 11.4
PRPF8Q6P2Q9 RNF10-218ENST00000543578 548 ntTSL 44.94□□□□□ -1.622e-9■■□□□ 11.4
PRPF8Q6P2Q9 SDC2-206ENST00000521590 507 ntTSL 44.92□□□□□ -1.622e-7■■□□□ 11.4
PRPF8Q6P2Q9 CS-210ENST00000547912 674 ntTSL 24.46□□□□□ -1.72e-7■■□□□ 11.4
PRPF8Q6P2Q9 CCDC144NL-AS1-210ENST00000577968 821 ntTSL 1 (best)4.23□□□□□ -1.732e-7■■□□□ 11.4
PRPF8Q6P2Q9 MAPK1IP1L-202ENST00000553976 517 ntTSL 33.93□□□□□ -1.782e-7■■□□□ 11.4
PRPF8Q6P2Q9 LAMB1-213ENST00000491196 379 ntTSL 23.93□□□□□ -1.782e-6■■□□□ 11.4
PRPF8Q6P2Q9 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC3.82□□□□□ -1.82e-7■■□□□ 11.4
PRPF8Q6P2Q9 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.8□□□□□ -1.82e-7■■□□□ 11.4
PRPF8Q6P2Q9 SDC2-208ENST00000523877 621 ntTSL 53.51□□□□□ -1.852e-7■■□□□ 11.4
PRPF8Q6P2Q9 DNAJB4-204ENST00000477671 737 ntTSL 53.44□□□□□ -1.862e-7■■□□□ 11.4
PRPF8Q6P2Q9 RFX7-202ENST00000559847 4165 ntTSL 1 (best)3.28□□□□□ -1.894e-16■■□□□ 11.4
PRPF8Q6P2Q9 TSG101-206ENST00000542488 304 ntTSL 52.7□□□□□ -1.982e-9■■□□□ 11.4
PRPF8Q6P2Q9 CYTOR-203ENST00000409139 519 ntTSL 32.45□□□□□ -2.022e-7■■□□□ 11.4
PRPF8Q6P2Q9 ARIH1-209ENST00000567762 319 ntTSL 32.44□□□□□ -2.023e-29■■□□□ 11.4
PRPF8Q6P2Q9 NR2C1-215ENST00000552417 379 ntTSL 31.92□□□□□ -2.12e-7■■□□□ 11.4
PRPF8Q6P2Q9 NPEPPS-214ENST00000529602 512 ntTSL 51.4□□□□□ -2.192e-7■■□□□ 11.4
PRPF8Q6P2Q9 PKP4-203ENST00000411900 552 ntTSL 48.62□□□□□ -1.033e-7■■□□□ 11.4
PRPF8Q6P2Q9 PKP4-207ENST00000457109 520 ntTSL 37.47□□□□□ -1.213e-7■■□□□ 11.4
PRPF8Q6P2Q9 SEC63-203ENST00000446496 583 ntTSL 416.41■□□□□ 0.229e-16■■□□□ 11.4
PRPF8Q6P2Q9 SEC63-205ENST00000460009 482 ntTSL 511.21□□□□□ -0.629e-16■■□□□ 11.4
PRPF8Q6P2Q9 ENTPD6-216ENST00000481322 414 ntTSL 310.42□□□□□ -0.744e-19■■□□□ 11.4
PRPF8Q6P2Q9 YIPF3-217ENST00000514627 854 ntTSL 310.85□□□□□ -0.671e-7■■□□□ 11.4
PRPF8Q6P2Q9 YIPF3-201ENST00000372417 406 ntTSL 27.58□□□□□ -1.21e-7■■□□□ 11.4
PRPF8Q6P2Q9 SELENOP-201ENST00000505309 573 ntTSL 29.88□□□□□ -0.836e-9■■□□□ 11.4
PRPF8Q6P2Q9 VASP-211ENST00000592139 424 ntTSL 319.47■□□□□ 0.712e-7■■□□□ 11.4
PRPF8Q6P2Q9 VASP-210ENST00000590603 388 ntTSL 217.54■□□□□ 0.42e-7■■□□□ 11.4
PRPF8Q6P2Q9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.6■□□□□ 0.092e-7■■□□□ 11.4
PRPF8Q6P2Q9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.352e-7■■□□□ 11.4
PRPF8Q6P2Q9 EPS8L2-209ENST00000527199 540 ntTSL 319.11■□□□□ 0.652e-19■■□□□ 11.4
PRPF8Q6P2Q9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.936e-6■■□□□ 11.4
PRPF8Q6P2Q9 IZUMO4-205ENST00000481489 1065 ntTSL 220.36■□□□□ 0.856e-6■■□□□ 11.4
PRPF8Q6P2Q9 IZUMO4-207ENST00000498554 929 ntTSL 519.24■□□□□ 0.676e-6■■□□□ 11.4
PRPF8Q6P2Q9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.516e-6■■□□□ 11.4
PRPF8Q6P2Q9 IZUMO4-204ENST00000478879 1925 ntTSL 218.05■□□□□ 0.486e-6■■□□□ 11.4
PRPF8Q6P2Q9 IZUMO4-206ENST00000497445 2144 ntTSL 217.91■□□□□ 0.466e-6■■□□□ 11.4
PRPF8Q6P2Q9 DPH1-207ENST00000571710 2013 ntTSL 1 (best)17.13■□□□□ 0.338e-9■■□□□ 11.4
PRPF8Q6P2Q9 CRACR2B-211ENST00000530737 834 ntTSL 315.39■□□□□ 0.056e-6■■□□□ 11.4
PRPF8Q6P2Q9 MPRIP-214ENST00000579361 844 ntTSL 39.22□□□□□ -0.933e-14■■□□□ 11.4
PRPF8Q6P2Q9 MPRIP-208ENST00000462033 309 ntTSL 26.57□□□□□ -1.363e-14■■□□□ 11.4
PRPF8Q6P2Q9 OGT-211ENST00000498566 601 ntTSL 34.58□□□□□ -1.682e-15■■□□□ 11.4
PRPF8Q6P2Q9 FHL3-203ENST00000477194 1091 ntTSL 228.62■■■□□ 2.175e-11■■□□□ 11.4
PRPF8Q6P2Q9 S100PBP-207ENST00000482212 706 ntTSL 219.87■□□□□ 0.772e-7■■□□□ 11.4
PRPF8Q6P2Q9 TMA7-202ENST00000477624 619 ntTSL 1 (best)18.56■□□□□ 0.562e-9■■□□□ 11.4
PRPF8Q6P2Q9 ARRDC1-212ENST00000497877 831 ntTSL 518.11■□□□□ 0.492e-7■■□□□ 11.4
PRPF8Q6P2Q9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.45e-11■■□□□ 11.4
PRPF8Q6P2Q9 TMA7-203ENST00000479126 688 ntTSL 217.44■□□□□ 0.382e-9■■□□□ 11.4
PRPF8Q6P2Q9 RBM42-207ENST00000592526 1012 ntTSL 217.29■□□□□ 0.366e-6■■□□□ 11.4
PRPF8Q6P2Q9 FHL3-202ENST00000475084 882 ntTSL 516.13■□□□□ 0.175e-11■■□□□ 11.4
PRPF8Q6P2Q9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.142e-9■■□□□ 11.4
PRPF8Q6P2Q9 STAR-204ENST00000522050 748 ntTSL 514.36□□□□□ -0.112e-7■■□□□ 11.4
PRPF8Q6P2Q9 FHL3-205ENST00000485803 1468 ntTSL 1 (best)14.34□□□□□ -0.115e-11■■□□□ 11.4
PRPF8Q6P2Q9 S100PBP-204ENST00000474103 417 ntTSL 514.24□□□□□ -0.132e-7■■□□□ 11.4
PRPF8Q6P2Q9 SGSM3-206ENST00000467915 769 ntTSL 313.69□□□□□ -0.221e-8■■□□□ 11.4
PRPF8Q6P2Q9 S100PBP-212ENST00000529027 429 ntTSL 313.56□□□□□ -0.242e-7■■□□□ 11.4
PRPF8Q6P2Q9 HSPG2-214ENST00000635682 921 ntTSL 512.68□□□□□ -0.388e-9■■□□□ 11.4
PRPF8Q6P2Q9 STAR-203ENST00000521236 402 ntTSL 312.34□□□□□ -0.432e-7■■□□□ 11.4
PRPF8Q6P2Q9 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.462e-7■■□□□ 11.4
PRPF8Q6P2Q9 SGSM3-208ENST00000470518 854 ntTSL 311.72□□□□□ -0.531e-8■■□□□ 11.4
PRPF8Q6P2Q9 PTGES3L-203ENST00000451885 557 ntTSL 411.57□□□□□ -0.562e-7■■□□□ 11.4
PRPF8Q6P2Q9 PTGES3L-206ENST00000591916 855 ntAPPRIS P1 TSL 311.3□□□□□ -0.62e-7■■□□□ 11.4
PRPF8Q6P2Q9 ARRDC1-210ENST00000491911 3185 ntTSL 211□□□□□ -0.652e-7■■□□□ 11.4
PRPF8Q6P2Q9 PTGES3L-AARSD1-207ENST00000454303 594 ntTSL 510.53□□□□□ -0.722e-7■■□□□ 11.4
PRPF8Q6P2Q9 PTGES3L-204ENST00000462157 1676 ntTSL 210.44□□□□□ -0.742e-7■■□□□ 11.4
PRPF8Q6P2Q9 RPL27A-208ENST00000530913 805 ntTSL 2 BASIC9.01□□□□□ -0.972e-7■■□□□ 11.4
PRPF8Q6P2Q9 S100PBP-210ENST00000526230 573 ntTSL 48.92□□□□□ -0.982e-7■■□□□ 11.4
PRPF8Q6P2Q9 MIR6834-201ENST00000622807 81 ntBASIC8.49□□□□□ -1.052e-7■■□□□ 11.4
PRPF8Q6P2Q9 FHL3-204ENST00000483132 607 ntTSL 28.26□□□□□ -1.092e-7■■□□□ 11.4
PRPF8Q6P2Q9 STAR-202ENST00000520114 3448 ntTSL 27.75□□□□□ -1.172e-7■■□□□ 11.4
PRPF8Q6P2Q9 PTGES3L-201ENST00000409446 1781 ntTSL 2 BASIC7.14□□□□□ -1.272e-7■■□□□ 11.4
PRPF8Q6P2Q9 S100PBP-214ENST00000530710 725 ntTSL 47.05□□□□□ -1.282e-7■■□□□ 11.4
PRPF8Q6P2Q9 S100PBP-216ENST00000531256 551 ntTSL 46.03□□□□□ -1.442e-7■■□□□ 11.4
PRPF8Q6P2Q9 S100PBP-206ENST00000477248 345 ntTSL 34.8□□□□□ -1.642e-7■■□□□ 11.4
PRPF8Q6P2Q9 GART-212ENST00000466882 654 ntTSL 39.31□□□□□ -0.923e-10■■□□□ 11.4
PRPF8Q6P2Q9 STAT2-206ENST00000556140 1454 ntTSL 211.04□□□□□ -0.641e-6■■□□□ 11.4
PRPF8Q6P2Q9 STAT2-212ENST00000557417 1063 ntTSL 25.57□□□□□ -1.521e-6■■□□□ 11.4
PRPF8Q6P2Q9 PIGT-243ENST00000639292 1938 ntTSL 59.93□□□□□ -0.829e-7■■□□□ 11.4
PRPF8Q6P2Q9 PIGT-247ENST00000639664 1878 ntTSL 58.92□□□□□ -0.989e-7■■□□□ 11.4
PRPF8Q6P2Q9 PIGT-216ENST00000638415 1738 ntTSL 58.88□□□□□ -0.999e-7■■□□□ 11.4
PRPF8Q6P2Q9 PIGT-227ENST00000638710 2327 ntTSL 58.79□□□□□ -19e-7■■□□□ 11.4
PRPF8Q6P2Q9 RUNX1-208ENST00000455571 610 ntTSL 315.54■□□□□ 0.087e-15■□□□□ 11.3
Retrieved 100 of 73,762 protein–RNA pairs in 923.9 ms