RNA–Protein interactions for RNA: ENST00000491911.5

ARRDC1-210, Transcript of arrestin domain containing 1, humanhuman

TSL 2

Gene ARRDC1, Length 3,185 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-210ENST00000491911 NISCHQ9Y2I1 1504 aa27.52■■■□□ 2
ARRDC1-210ENST00000491911 SHROOM4Q9ULL8 1493 aa24.82■■□□□ 1.56
ARRDC1-210ENST00000491911 SUPT5HO00267 1087 aaKnown RBP24.48■■□□□ 1.51
ARRDC1-210ENST00000491911 DCAF8L2P0C7V8 631 aa24.03■■□□□ 1.44
ARRDC1-210ENST00000491911 SLC24A1O60721 1099 aa23.84■■□□□ 1.41
ARRDC1-210ENST00000491911 PCGF6Q9BYE7 350 aa23.49■■□□□ 1.35
ARRDC1-210ENST00000491911 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
ARRDC1-210ENST00000491911 CHIC1Q5VXU3 224 aa23.46■■□□□ 1.35
ARRDC1-210ENST00000491911 PPARGC1BQ86YN6 1023 aaKnown RBP23.34■■□□□ 1.33
ARRDC1-210ENST00000491911 HRCP23327 699 aa23.27■■□□□ 1.32
ARRDC1-210ENST00000491911 ZCCHC6Q5VYS8 1495 aaKnown RBP23.25■■□□□ 1.31
ARRDC1-210ENST00000491911 LOC105371045A0A1W2PR82 267 aa23.23■■□□□ 1.31
ARRDC1-210ENST00000491911 EHMT2Q96KQ7 1210 aa23.03■■□□□ 1.28
ARRDC1-210ENST00000491911 FAM9AQ8IZU1 332 aaPredicted RBP22.8■■□□□ 1.24
ARRDC1-210ENST00000491911 CCDC180Q9P1Z9 1646 aa22.74■■□□□ 1.23
ARRDC1-210ENST00000491911 TRIM26Q12899 539 aaPredicted RBP22.48■■□□□ 1.19
ARRDC1-210ENST00000491911 TRIM41Q8WV44 630 aa22.44■■□□□ 1.18
ARRDC1-210ENST00000491911 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.17
ARRDC1-210ENST00000491911 TTBK1Q5TCY1 1321 aaPredicted RBP22.29■■□□□ 1.16
ARRDC1-210ENST00000491911 SCRIBQ14160 1630 aa22.21■■□□□ 1.15
ARRDC1-210ENST00000491911 RSF1Q96T23 1441 aaPredicted RBP22.11■■□□□ 1.13
ARRDC1-210ENST00000491911 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
ARRDC1-210ENST00000491911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.01■■□□□ 1.11
ARRDC1-210ENST00000491911 ABCC9O60706 1549 aa21.97■■□□□ 1.11
ARRDC1-210ENST00000491911 SCAF1Q9H7N4 1312 aaKnown RBP21.89■■□□□ 1.09
ARRDC1-210ENST00000491911 ZEB1P37275 1124 aaPredicted RBP21.88■■□□□ 1.09
ARRDC1-210ENST00000491911 CECR2Q9BXF3 1484 aa21.86■■□□□ 1.09
ARRDC1-210ENST00000491911 CCER1Q8TC90 406 aaPredicted RBP21.83■■□□□ 1.09
ARRDC1-210ENST00000491911 DAXXQ9UER7 740 aaPredicted RBP21.67■■□□□ 1.06
ARRDC1-210ENST00000491911 MROH2BQ7Z745 1585 aa21.66■■□□□ 1.06
ARRDC1-210ENST00000491911 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
ARRDC1-210ENST00000491911 WIZO95785 1651 aa21.55■■□□□ 1.04
ARRDC1-210ENST00000491911 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
ARRDC1-210ENST00000491911 NEUROD1Q13562 356 aa21.55■■□□□ 1.04
ARRDC1-210ENST00000491911 YTHDC1Q96MU7 727 aaKnown RBP21.49■■□□□ 1.03
ARRDC1-210ENST00000491911 UBTFP17480 764 aaKnown RBP21.48■■□□□ 1.03
ARRDC1-210ENST00000491911 DIEXFQ68CQ4 756 aaKnown RBP21.46■■□□□ 1.03
ARRDC1-210ENST00000491911 ABCC8Q09428 1581 aa21.41■■□□□ 1.02
ARRDC1-210ENST00000491911 GTF3C3Q9Y5Q9 886 aa21.4■■□□□ 1.02
ARRDC1-210ENST00000491911 ACIN1Q9UKV3 1341 aaKnown RBP21.39■■□□□ 1.01
ARRDC1-210ENST00000491911 RTN4Q9NQC3 1192 aaKnown RBP21.36■■□□□ 1.01
ARRDC1-210ENST00000491911 HNRNPUL2Q1KMD3 747 aaKnown RBP21.36■■□□□ 1.01
ARRDC1-210ENST00000491911 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
ARRDC1-210ENST00000491911 PRKCSHP14314 528 aaPredicted RBP21.33■■□□□ 1.01
ARRDC1-210ENST00000491911 PABPN1Q86U42 306 aaKnown RBP eCLIP21.33■■□□□ 12e-6■□□□□ 9.6
ARRDC1-210ENST00000491911 SOGA1O94964 1423 aa21.31■■□□□ 1
ARRDC1-210ENST00000491911 MYT1Q01538 1121 aa21.31■■□□□ 1
ARRDC1-210ENST00000491911 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
ARRDC1-210ENST00000491911 CEP162Q5TB80 1403 aa21.23■□□□□ 0.99
ARRDC1-210ENST00000491911 PELP1Q8IZL8 1130 aaKnown RBP21.2■□□□□ 0.98
ARRDC1-210ENST00000491911 CENPBP07199 599 aaPredicted RBP21.18■□□□□ 0.98
ARRDC1-210ENST00000491911 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
ARRDC1-210ENST00000491911 NACADO15069 1562 aa21.16■□□□□ 0.98
ARRDC1-210ENST00000491911 BAZ1AQ9NRL2 1556 aaPredicted RBP21.09■□□□□ 0.97
ARRDC1-210ENST00000491911 ZNF316A6NFI3 1004 aaPredicted RBP21.06■□□□□ 0.96
ARRDC1-210ENST00000491911 MIER1Q8N108 512 aa21.04■□□□□ 0.96
ARRDC1-210ENST00000491911 NCBP3Q53F19 620 aaKnown RBP21.01■□□□□ 0.95
ARRDC1-210ENST00000491911 APLP2Q06481 763 aa20.97■□□□□ 0.95
ARRDC1-210ENST00000491911 EIF4G1Q04637 1599 aaKnown RBP20.96■□□□□ 0.95
ARRDC1-210ENST00000491911 TNIKQ9UKE5 1360 aa20.95■□□□□ 0.94
ARRDC1-210ENST00000491911 ERICH6Q7L0X2 663 aa20.93■□□□□ 0.94
ARRDC1-210ENST00000491911 SMARCA2P51531 1590 aa20.92■□□□□ 0.94
ARRDC1-210ENST00000491911 TOP2AP11388 1531 aaKnown RBP20.91■□□□□ 0.94
ARRDC1-210ENST00000491911 WRNQ14191 1432 aaPredicted RBP eCLIP20.88■□□□□ 0.93
ARRDC1-210ENST00000491911 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
ARRDC1-210ENST00000491911 ITGAEP38570 1179 aa20.85■□□□□ 0.93
ARRDC1-210ENST00000491911 GOLGA3Q08378 1498 aa20.8■□□□□ 0.92
ARRDC1-210ENST00000491911 CLIP1P30622 1438 aa20.77■□□□□ 0.92
ARRDC1-210ENST00000491911 RAPGEF2Q9Y4G8 1499 aa20.67■□□□□ 0.9
ARRDC1-210ENST00000491911 KANK4Q5T7N3 995 aaPredicted RBP20.64■□□□□ 0.89
ARRDC1-210ENST00000491911 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
ARRDC1-210ENST00000491911 EEA1Q15075 1411 aa20.62■□□□□ 0.89
ARRDC1-210ENST00000491911 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
ARRDC1-210ENST00000491911 UNC13AQ9UPW8 1703 aa20.58■□□□□ 0.88
ARRDC1-210ENST00000491911 VPS8Q8N3P4 1428 aa20.56■□□□□ 0.88
ARRDC1-210ENST00000491911 KCNH8Q96L42 1107 aa20.51■□□□□ 0.87
ARRDC1-210ENST00000491911 ATP1B4Q9UN42 357 aaPredicted RBP20.51■□□□□ 0.87
ARRDC1-210ENST00000491911 BCANQ96GW7 911 aa20.48■□□□□ 0.87
ARRDC1-210ENST00000491911 HIRIP3Q9BW71 556 aaPredicted RBP20.45■□□□□ 0.86
ARRDC1-210ENST00000491911 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
ARRDC1-210ENST00000491911 KIF21BO75037 1637 aa20.43■□□□□ 0.86
ARRDC1-210ENST00000491911 P3H3Q8IVL6 736 aa20.42■□□□□ 0.86
ARRDC1-210ENST00000491911 DHX57Q6P158 1386 aaKnown RBP20.41■□□□□ 0.86
ARRDC1-210ENST00000491911 AMER1Q5JTC6 1135 aaPredicted RBP20.41■□□□□ 0.86
ARRDC1-210ENST00000491911 BICRAQ9NZM4 1560 aa20.39■□□□□ 0.86
ARRDC1-210ENST00000491911 TIMELESSQ9UNS1 1208 aa20.39■□□□□ 0.85
ARRDC1-210ENST00000491911 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
ARRDC1-210ENST00000491911 SUPT16HQ9Y5B9 1047 aaKnown RBP20.36■□□□□ 0.85
ARRDC1-210ENST00000491911 KCNA4P22459 653 aa20.34■□□□□ 0.85
ARRDC1-210ENST00000491911 FAM50AQ14320 339 aaKnown RBP20.32■□□□□ 0.84
ARRDC1-210ENST00000491911 SIN3AQ96ST3 1273 aa20.3■□□□□ 0.84
ARRDC1-210ENST00000491911 DDX10Q13206 875 aaKnown RBP20.28■□□□□ 0.84
ARRDC1-210ENST00000491911 ARAP1Q96P48 1450 aa20.27■□□□□ 0.84
ARRDC1-210ENST00000491911 ARXQ96QS3 562 aa20.2■□□□□ 0.82
ARRDC1-210ENST00000491911 CCNB3Q8WWL7 1395 aa20.17■□□□□ 0.82
ARRDC1-210ENST00000491911 TRIM52Q96A61 297 aa20.17■□□□□ 0.82
ARRDC1-210ENST00000491911 RAB3GAP2Q9H2M9 1393 aa20.14■□□□□ 0.81
ARRDC1-210ENST00000491911 FKBP8Q14318 412 aa20.13■□□□□ 0.81
ARRDC1-210ENST00000491911 TSHZ2Q9NRE2 1034 aa20.11■□□□□ 0.81
ARRDC1-210ENST00000491911 TULP1O00294 542 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms