RNA–Protein interactions for RNA: ENST00000491196.1

LAMB1-213, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-213ENST00000491196 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
LAMB1-213ENST00000491196 CHIC1Q5VXU3 224 aa16.17■□□□□ 0.18
LAMB1-213ENST00000491196 PHF23Q9BUL5 403 aaPredicted RBP14.35□□□□□ -0.11
LAMB1-213ENST00000491196 SENP3Q9H4L4 574 aaPredicted RBP13.92□□□□□ -0.18
LAMB1-213ENST00000491196 PLPPR3Q6T4P5 718 aa13.08□□□□□ -0.32
LAMB1-213ENST00000491196 FOXD1Q16676 465 aa13.05□□□□□ -0.32
LAMB1-213ENST00000491196 PPP6R1Q9UPN7 881 aa12.68□□□□□ -0.38
LAMB1-213ENST00000491196 ADRA2BP18089 450 aa12.61□□□□□ -0.39
LAMB1-213ENST00000491196 PIAS4Q8N2W9 510 aaPredicted RBP12.23□□□□□ -0.45
LAMB1-213ENST00000491196 MSH5O43196 834 aa11.86□□□□□ -0.51
LAMB1-213ENST00000491196 PPP4R3CPQ6ZMV5 832 aa11.6□□□□□ -0.55
LAMB1-213ENST00000491196 MAPK8IP2Q13387 824 aaPredicted RBP11.48□□□□□ -0.57
LAMB1-213ENST00000491196 SCAF1Q9H7N4 1312 aaKnown RBP11.47□□□□□ -0.57
LAMB1-213ENST00000491196 KCNA4P22459 653 aa11.42□□□□□ -0.58
LAMB1-213ENST00000491196 NCBP3Q53F19 620 aaKnown RBP11.39□□□□□ -0.59
LAMB1-213ENST00000491196 POTEDQ86YR6 584 aa11.23□□□□□ -0.61
LAMB1-213ENST00000491196 NISCHQ9Y2I1 1504 aa11.22□□□□□ -0.61
LAMB1-213ENST00000491196 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
LAMB1-213ENST00000491196 DMRT2Q9Y5R5 561 aa11.17□□□□□ -0.62
LAMB1-213ENST00000491196 NPM3O75607 178 aaKnown RBP11.16□□□□□ -0.62
LAMB1-213ENST00000491196 RNF216Q9NWF9 866 aaPredicted RBP10.99□□□□□ -0.65
LAMB1-213ENST00000491196 HOXD11P31277 338 aaPredicted RBP10.98□□□□□ -0.65
LAMB1-213ENST00000491196 SLC4A1APQ9BWU0 796 aaKnown RBP10.91□□□□□ -0.66
LAMB1-213ENST00000491196 DNAJC5BQ9UF47 199 aa10.78□□□□□ -0.68
LAMB1-213ENST00000491196 EHMT2Q96KQ7 1210 aa10.72□□□□□ -0.69
LAMB1-213ENST00000491196 DCAF8L1A6NGE4 600 aa10.65□□□□□ -0.7
LAMB1-213ENST00000491196 SLC4A2P04920 1241 aa10.59□□□□□ -0.71
LAMB1-213ENST00000491196 ZBTB22O15209 634 aa10.58□□□□□ -0.72
LAMB1-213ENST00000491196 CSRNP3Q8WYN3 585 aa10.51□□□□□ -0.73
LAMB1-213ENST00000491196 FOXD4L1Q9NU39 408 aa10.48□□□□□ -0.73
LAMB1-213ENST00000491196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.39□□□□□ -0.755e-7■□□□□ 10.7
LAMB1-213ENST00000491196 U3KPZ7 1027 aaPredicted RBP10.32□□□□□ -0.76
LAMB1-213ENST00000491196 MYCNP04198 464 aaPredicted RBP10.29□□□□□ -0.76
LAMB1-213ENST00000491196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.27□□□□□ -0.77
LAMB1-213ENST00000491196 HNRNPUL2Q1KMD3 747 aaKnown RBP10.27□□□□□ -0.77
LAMB1-213ENST00000491196 RNF39Q9H2S5 420 aa10.27□□□□□ -0.77
LAMB1-213ENST00000491196 APLP2Q06481 763 aa10.19□□□□□ -0.78
LAMB1-213ENST00000491196 SAMD1Q6SPF0 538 aaPredicted RBP10.17□□□□□ -0.78
LAMB1-213ENST00000491196 ATXN8OSP0DMR3 200 aa10.16□□□□□ -0.78
LAMB1-213ENST00000491196 ATF5Q9Y2D1 282 aaPredicted RBP10.13□□□□□ -0.79
LAMB1-213ENST00000491196 C1QBPQ07021 282 aaKnown RBP10.07□□□□□ -0.8
LAMB1-213ENST00000491196 SPINK5Q9NQ38 1064 aaPredicted RBP10.05□□□□□ -0.8
LAMB1-213ENST00000491196 CCDC180Q9P1Z9 1646 aa9.95□□□□□ -0.82
LAMB1-213ENST00000491196 ABCC9O60706 1549 aa9.94□□□□□ -0.82
LAMB1-213ENST00000491196 CACNB1Q02641 598 aaPredicted RBP9.92□□□□□ -0.82
LAMB1-213ENST00000491196 CAPN15O75808 1086 aa9.9□□□□□ -0.82
LAMB1-213ENST00000491196 TRHP20396 242 aaPredicted RBP9.89□□□□□ -0.83
LAMB1-213ENST00000491196 ZNF219Q9P2Y4 722 aaPredicted RBP9.88□□□□□ -0.83
LAMB1-213ENST00000491196 DSG3P32926 999 aa9.8□□□□□ -0.84
LAMB1-213ENST00000491196 ABCB7O75027 752 aa9.78□□□□□ -0.84
LAMB1-213ENST00000491196 POLA2Q14181 598 aa9.77□□□□□ -0.85
LAMB1-213ENST00000491196 ZBTB12Q9Y330 459 aaPredicted RBP9.67□□□□□ -0.86
LAMB1-213ENST00000491196 FBLN2P98095 1184 aa9.66□□□□□ -0.86
LAMB1-213ENST00000491196 MKRN4PQ13434 485 aaPredicted RBP9.65□□□□□ -0.86
LAMB1-213ENST00000491196 FKBP8Q14318 412 aa9.54□□□□□ -0.88
LAMB1-213ENST00000491196 RB1CC1Q8TDY2 1594 aa9.44□□□□□ -0.9
LAMB1-213ENST00000491196 OSCARQ8IYS5 282 aa9.43□□□□□ -0.9
LAMB1-213ENST00000491196 SPDYE4A6NLX3 237 aa9.42□□□□□ -0.9
LAMB1-213ENST00000491196 DCAF8L2P0C7V8 631 aa9.42□□□□□ -0.9
LAMB1-213ENST00000491196 NACADO15069 1562 aa9.41□□□□□ -0.9
LAMB1-213ENST00000491196 FBXO3Q9UK99 471 aa9.33□□□□□ -0.92
LAMB1-213ENST00000491196 ZCCHC6Q5VYS8 1495 aaKnown RBP9.33□□□□□ -0.92
LAMB1-213ENST00000491196 MYO15BQ96JP2 1530 aa9.32□□□□□ -0.92
LAMB1-213ENST00000491196 SPDYE2BA6NHP3 402 aa9.32□□□□□ -0.92
LAMB1-213ENST00000491196 SPDYE6P0CI01 402 aa9.32□□□□□ -0.92
LAMB1-213ENST00000491196 SPDYE2Q495Y8 402 aa9.32□□□□□ -0.92
LAMB1-213ENST00000491196 PABPN1Q86U42 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
LAMB1-213ENST00000491196 ZNF692Q9BU19 519 aaPredicted RBP9.3□□□□□ -0.92
LAMB1-213ENST00000491196 SSUH2Q9Y2M2 353 aa9.27□□□□□ -0.93
LAMB1-213ENST00000491196 RBM42Q9BTD8 480 aaKnown RBP9.26□□□□□ -0.93
LAMB1-213ENST00000491196 PROM2Q8N271 834 aa9.25□□□□□ -0.93
LAMB1-213ENST00000491196 DCAF1Q9Y4B6 1507 aa9.25□□□□□ -0.93
LAMB1-213ENST00000491196 UNC13AQ9UPW8 1703 aa9.23□□□□□ -0.93
LAMB1-213ENST00000491196 BICRAQ9NZM4 1560 aa9.23□□□□□ -0.93
LAMB1-213ENST00000491196 STAG3Q9UJ98 1225 aa9.16□□□□□ -0.94
LAMB1-213ENST00000491196 AKT1S1Q96B36 256 aa9.15□□□□□ -0.94
LAMB1-213ENST00000491196 SCRIBQ14160 1630 aa9.13□□□□□ -0.95
LAMB1-213ENST00000491196 REM2Q8IYK8 340 aaPredicted RBP9.12□□□□□ -0.95
LAMB1-213ENST00000491196 PLEKHG5O94827 1062 aa9.09□□□□□ -0.95
LAMB1-213ENST00000491196 AMER1Q5JTC6 1135 aaPredicted RBP9.08□□□□□ -0.96
LAMB1-213ENST00000491196 VASPP50552 380 aaPredicted RBP9.05□□□□□ -0.96
LAMB1-213ENST00000491196 SHROOM4Q9ULL8 1493 aa9.04□□□□□ -0.96
LAMB1-213ENST00000491196 SPDYE1Q8NFV5 336 aaPredicted RBP9.04□□□□□ -0.96
LAMB1-213ENST00000491196 PITPNM1O00562 1244 aa9.02□□□□□ -0.97
LAMB1-213ENST00000491196 PLCD3Q8N3E9 789 aa9□□□□□ -0.97
LAMB1-213ENST00000491196 ZBTB47Q9UFB7 747 aaPredicted RBP8.99□□□□□ -0.97
LAMB1-213ENST00000491196 CLEC11AQ9Y240 323 aa8.98□□□□□ -0.97
LAMB1-213ENST00000491196 EIF4G1Q04637 1599 aaKnown RBP8.96□□□□□ -0.97
LAMB1-213ENST00000491196 MIER1Q8N108 512 aa8.96□□□□□ -0.98
LAMB1-213ENST00000491196 KLHL34Q8N239 644 aa8.96□□□□□ -0.98
LAMB1-213ENST00000491196 CC2D2AQ9P2K1 1620 aa8.95□□□□□ -0.98
LAMB1-213ENST00000491196 CECR2Q9BXF3 1484 aa8.93□□□□□ -0.98
LAMB1-213ENST00000491196 PRR29P0C7W0 189 aa8.92□□□□□ -0.98
LAMB1-213ENST00000491196 IFNLR1Q8IU57 520 aaPredicted RBP8.89□□□□□ -0.99
LAMB1-213ENST00000491196 CHRDL2Q6WN34 429 aa8.88□□□□□ -0.99
LAMB1-213ENST00000491196 CREBZFQ9NS37 354 aa8.87□□□□□ -0.99
LAMB1-213ENST00000491196 SPOCK2Q92563 424 aa8.86□□□□□ -0.99
LAMB1-213ENST00000491196 RTN4Q9NQC3 1192 aaKnown RBP8.86□□□□□ -0.99
LAMB1-213ENST00000491196 FXR2P51116 673 aaKnown RBP eCLIP8.85□□□□□ -0.994e-10■□□□□ 8.8
LAMB1-213ENST00000491196 CHADLQ6NUI6 762 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms