RNA–Protein interactions for RNA: ENST00000543578.1

RNF10-218, Transcript of ring finger protein 10, humanhuman

TSL 4

Gene RNF10, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF10-218ENST00000543578 CHIC1Q5VXU3 224 aa14.53□□□□□ -0.08
RNF10-218ENST00000543578 NISCHQ9Y2I1 1504 aa13.82□□□□□ -0.2
RNF10-218ENST00000543578 AEBP2Q6ZN18 517 aaPredicted RBP13.69□□□□□ -0.22
RNF10-218ENST00000543578 ABCC9O60706 1549 aa13.38□□□□□ -0.27
RNF10-218ENST00000543578 DNAJC5BQ9UF47 199 aa13.21□□□□□ -0.29
RNF10-218ENST00000543578 PHF23Q9BUL5 403 aaPredicted RBP12.9□□□□□ -0.34
RNF10-218ENST00000543578 SLC24A1O60721 1099 aa12.82□□□□□ -0.36
RNF10-218ENST00000543578 CCDC180Q9P1Z9 1646 aa12.7□□□□□ -0.38
RNF10-218ENST00000543578 EHMT2Q96KQ7 1210 aa12.66□□□□□ -0.38
RNF10-218ENST00000543578 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
RNF10-218ENST00000543578 RB1CC1Q8TDY2 1594 aa12.41□□□□□ -0.42
RNF10-218ENST00000543578 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
RNF10-218ENST00000543578 PLPPR3Q6T4P5 718 aa12.3□□□□□ -0.44
RNF10-218ENST00000543578 NACADO15069 1562 aa12.17□□□□□ -0.46
RNF10-218ENST00000543578 BICRAQ9NZM4 1560 aa12.14□□□□□ -0.47
RNF10-218ENST00000543578 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
RNF10-218ENST00000543578 UNC13AQ9UPW8 1703 aa12.11□□□□□ -0.47
RNF10-218ENST00000543578 KCNA4P22459 653 aa12.06□□□□□ -0.48
RNF10-218ENST00000543578 CC2D2AQ9P2K1 1620 aa12.05□□□□□ -0.48
RNF10-218ENST00000543578 CSRNP3Q8WYN3 585 aa12.05□□□□□ -0.48
RNF10-218ENST00000543578 AMER1Q5JTC6 1135 aaPredicted RBP11.93□□□□□ -0.5
RNF10-218ENST00000543578 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
RNF10-218ENST00000543578 SHROOM4Q9ULL8 1493 aa11.9□□□□□ -0.5
RNF10-218ENST00000543578 EIF4G1Q04637 1599 aaKnown RBP11.88□□□□□ -0.51
RNF10-218ENST00000543578 CUX2O14529 1486 aa11.85□□□□□ -0.51
RNF10-218ENST00000543578 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
RNF10-218ENST00000543578 DCAF8L2P0C7V8 631 aa11.8□□□□□ -0.52
RNF10-218ENST00000543578 TRIM41Q8WV44 630 aa11.71□□□□□ -0.53
RNF10-218ENST00000543578 SLC4A1APQ9BWU0 796 aaKnown RBP11.69□□□□□ -0.54
RNF10-218ENST00000543578 ERCC6Q03468 1493 aa11.57□□□□□ -0.56
RNF10-218ENST00000543578 NCBP3Q53F19 620 aaKnown RBP11.56□□□□□ -0.56
RNF10-218ENST00000543578 SCRIBQ14160 1630 aa11.52□□□□□ -0.57
RNF10-218ENST00000543578 ADRA2BP18089 450 aa11.45□□□□□ -0.58
RNF10-218ENST00000543578 DCAF1Q9Y4B6 1507 aa11.41□□□□□ -0.58
RNF10-218ENST00000543578 SENP3Q9H4L4 574 aaPredicted RBP11.41□□□□□ -0.58
RNF10-218ENST00000543578 ZCCHC6Q5VYS8 1495 aaKnown RBP11.38□□□□□ -0.59
RNF10-218ENST00000543578 THOC2Q8NI27 1593 aaKnown RBP11.37□□□□□ -0.59
RNF10-218ENST00000543578 NESP48681 1621 aa11.31□□□□□ -0.6
RNF10-218ENST00000543578 NCAPD3P42695 1498 aa11.26□□□□□ -0.61
RNF10-218ENST00000543578 DAXXQ9UER7 740 aaPredicted RBP11.25□□□□□ -0.61
RNF10-218ENST00000543578 SMARCA2P51531 1590 aa11.2□□□□□ -0.62
RNF10-218ENST00000543578 BAZ1AQ9NRL2 1556 aaPredicted RBP11.17□□□□□ -0.62
RNF10-218ENST00000543578 ZBTB22O15209 634 aa11.14□□□□□ -0.63
RNF10-218ENST00000543578 ATAD2BQ9ULI0 1458 aa11.13□□□□□ -0.63
RNF10-218ENST00000543578 HMGXB3Q12766 1538 aa11.13□□□□□ -0.63
RNF10-218ENST00000543578 KIF21AQ7Z4S6 1674 aa11.11□□□□□ -0.63
RNF10-218ENST00000543578 RIMBP3CA6NJZ7 1639 aa11.1□□□□□ -0.63
RNF10-218ENST00000543578 RIMBP3BA6NNM3 1639 aa11.1□□□□□ -0.63
RNF10-218ENST00000543578 RIMBP3Q9UFD9 1639 aa11.1□□□□□ -0.63
RNF10-218ENST00000543578 OSCARQ8IYS5 282 aa11.1□□□□□ -0.63
RNF10-218ENST00000543578 LAMC3Q9Y6N6 1575 aa11.1□□□□□ -0.63
RNF10-218ENST00000543578 PRKCSHP14314 528 aaPredicted RBP11.05□□□□□ -0.64
RNF10-218ENST00000543578 WDR62O43379 1518 aa11.04□□□□□ -0.64
RNF10-218ENST00000543578 PDS5BQ9NTI5 1447 aa11.03□□□□□ -0.64
RNF10-218ENST00000543578 MRC2Q9UBG0 1479 aa11.02□□□□□ -0.65
RNF10-218ENST00000543578 ARHGEF11O15085 1522 aa11.01□□□□□ -0.65
RNF10-218ENST00000543578 PPP4R3CPQ6ZMV5 832 aa10.98□□□□□ -0.65
RNF10-218ENST00000543578 BCANQ96GW7 911 aa10.98□□□□□ -0.65
RNF10-218ENST00000543578 PPP6R1Q9UPN7 881 aa10.98□□□□□ -0.65
RNF10-218ENST00000543578 TRHP20396 242 aaPredicted RBP10.96□□□□□ -0.65
RNF10-218ENST00000543578 TAOK2Q9UL54 1235 aa10.96□□□□□ -0.65
RNF10-218ENST00000543578 BAZ1BQ9UIG0 1483 aaKnown RBP10.95□□□□□ -0.66
RNF10-218ENST00000543578 ARXQ96QS3 562 aa10.93□□□□□ -0.66
RNF10-218ENST00000543578 SMARCA4P51532 1647 aa10.92□□□□□ -0.66
RNF10-218ENST00000543578 PLCB2Q00722 1185 aa10.91□□□□□ -0.66
RNF10-218ENST00000543578 ILDR1Q86SU0 546 aaPredicted RBP10.9□□□□□ -0.66
RNF10-218ENST00000543578 CYB5RLQ6IPT4 315 aa10.89□□□□□ -0.67
RNF10-218ENST00000543578 ARAP1Q96P48 1450 aa10.88□□□□□ -0.67
RNF10-218ENST00000543578 NPM3O75607 178 aaKnown RBP10.88□□□□□ -0.67
RNF10-218ENST00000543578 CADPSQ9ULU8 1353 aa10.86□□□□□ -0.67
RNF10-218ENST00000543578 PEG3Q9GZU2 1588 aa10.86□□□□□ -0.67
RNF10-218ENST00000543578 CEP164Q9UPV0 1460 aa10.82□□□□□ -0.68
RNF10-218ENST00000543578 FKBP8Q14318 412 aa10.77□□□□□ -0.69
RNF10-218ENST00000543578 FOXD4L1Q9NU39 408 aa10.77□□□□□ -0.69
RNF10-218ENST00000543578 TIMELESSQ9UNS1 1208 aa10.75□□□□□ -0.69
RNF10-218ENST00000543578 FANCD2Q9BXW9 1451 aa10.74□□□□□ -0.69
RNF10-218ENST00000543578 URB2Q14146 1524 aaKnown RBP10.74□□□□□ -0.69
RNF10-218ENST00000543578 TPRNQ4KMQ1 711 aa10.72□□□□□ -0.69
RNF10-218ENST00000543578 RSF1Q96T23 1441 aaPredicted RBP10.72□□□□□ -0.69
RNF10-218ENST00000543578 ZNF608Q9ULD9 1512 aaPredicted RBP10.71□□□□□ -0.69
RNF10-218ENST00000543578 HAP1P54257 671 aaPredicted RBP10.7□□□□□ -0.7
RNF10-218ENST00000543578 VSIG10Q8N0Z9 540 aa10.66□□□□□ -0.7
RNF10-218ENST00000543578 MROH2BQ7Z745 1585 aa10.65□□□□□ -0.71
RNF10-218ENST00000543578 IFT140Q96RY7 1462 aa10.63□□□□□ -0.71
RNF10-218ENST00000543578 TULP1O00294 542 aaPredicted RBP10.63□□□□□ -0.71
RNF10-218ENST00000543578 CHD1O14646 1710 aa10.62□□□□□ -0.71
RNF10-218ENST00000543578 CFTRP13569 1480 aa10.61□□□□□ -0.71
RNF10-218ENST00000543578 EIF4G3O43432 1585 aaKnown RBP10.61□□□□□ -0.71
RNF10-218ENST00000543578 ERICH6Q7L0X2 663 aa10.6□□□□□ -0.71
RNF10-218ENST00000543578 HOMEZQ8IX15 550 aa10.57□□□□□ -0.72
RNF10-218ENST00000543578 CLASP1Q7Z460 1538 aa10.56□□□□□ -0.72
RNF10-218ENST00000543578 KDM4FA0A1W2PPD8 638 aa10.52□□□□□ -0.73
RNF10-218ENST00000543578 GTF3C3Q9Y5Q9 886 aa10.49□□□□□ -0.73
RNF10-218ENST00000543578 AQRO60306 1485 aaKnown RBP eCLIP10.49□□□□□ -0.733e-6■■■■□ 24.7
RNF10-218ENST00000543578 TOPBP1Q92547 1522 aa10.48□□□□□ -0.73
RNF10-218ENST00000543578 FBLN2P98095 1184 aa10.47□□□□□ -0.73
RNF10-218ENST00000543578 GAPVD1Q14C86 1478 aa10.46□□□□□ -0.74
RNF10-218ENST00000543578 TARBP1Q13395 1621 aaKnown RBP10.45□□□□□ -0.74
RNF10-218ENST00000543578 FOXD1Q16676 465 aa10.45□□□□□ -0.74
RNF10-218ENST00000543578 WIZO95785 1651 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms