Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EXOSC1Q9Y3B2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 AC012414.1-201ENST00000556676 535 ntBASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 TPRG1LP1-201ENST00000598702 760 ntBASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.92■□□□□ 0.46
EXOSC1Q9Y3B2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 AC079140.4-201ENST00000507448 529 ntBASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
EXOSC1Q9Y3B2 AC138932.1-201ENST00000534164 6830 ntBASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 FAM21FP-204ENST00000608637 956 ntBASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.9■□□□□ 0.46
EXOSC1Q9Y3B2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms