Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LSM2Q9Y333 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
LSM2Q9Y333 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.82■□□□□ 0.44
LSM2Q9Y333 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.82■□□□□ 0.44
LSM2Q9Y333 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.82■□□□□ 0.44
LSM2Q9Y333 AC131281.2-201ENST00000520478 145 ntBASIC17.82■□□□□ 0.44
LSM2Q9Y333 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.82■□□□□ 0.44
LSM2Q9Y333 AL035685.1-201ENST00000636663 812 ntBASIC17.82■□□□□ 0.44
LSM2Q9Y333 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.82■□□□□ 0.44
LSM2Q9Y333 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.82■□□□□ 0.44
LSM2Q9Y333 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 TSPY26P-201ENST00000476365 1326 ntBASIC17.81■□□□□ 0.44
LSM2Q9Y333 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM2Q9Y333 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
LSM2Q9Y333 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM2Q9Y333 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM2Q9Y333 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LSM2Q9Y333 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.8■□□□□ 0.44
LSM2Q9Y333 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.8■□□□□ 0.44
LSM2Q9Y333 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LSM2Q9Y333 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
LSM2Q9Y333 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM2Q9Y333 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.8■□□□□ 0.44
LSM2Q9Y333 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM2Q9Y333 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.8■□□□□ 0.44
LSM2Q9Y333 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LSM2Q9Y333 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LSM2Q9Y333 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LSM2Q9Y333 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM2Q9Y333 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM2Q9Y333 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM2Q9Y333 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.8■□□□□ 0.44
LSM2Q9Y333 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LSM2Q9Y333 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LSM2Q9Y333 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM2Q9Y333 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM2Q9Y333 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM2Q9Y333 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.8■□□□□ 0.44
LSM2Q9Y333 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSM2Q9Y333 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LSM2Q9Y333 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LSM2Q9Y333 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.79■□□□□ 0.44
LSM2Q9Y333 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSM2Q9Y333 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.79■□□□□ 0.44
LSM2Q9Y333 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSM2Q9Y333 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LSM2Q9Y333 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.79■□□□□ 0.44
LSM2Q9Y333 AC138907.5-202ENST00000569484 235 ntBASIC17.79■□□□□ 0.44
LSM2Q9Y333 TPRG1LP1-201ENST00000598702 760 ntBASIC17.79■□□□□ 0.44
LSM2Q9Y333 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LSM2Q9Y333 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.79■□□□□ 0.44
LSM2Q9Y333 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.79■□□□□ 0.44
LSM2Q9Y333 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.79■□□□□ 0.44
LSM2Q9Y333 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LSM2Q9Y333 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.79■□□□□ 0.44
LSM2Q9Y333 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms