Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGB4Q9UN71 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDHGB4Q9UN71 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.39■□□□□ 0.7
PCDHGB4Q9UN71 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
PCDHGB4Q9UN71 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
PCDHGB4Q9UN71 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGB4Q9UN71 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 KRT18P20-201ENST00000548986 1279 ntBASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 TERF1P2-201ENST00000583350 1212 ntBASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB4Q9UN71 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 YBX1P1-201ENST00000445822 960 ntBASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 CCDC92B-201ENST00000575506 885 ntBASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 AC092720.2-201ENST00000602388 1665 ntBASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB4Q9UN71 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 TNXA-203ENST00000507684 2038 ntBASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 SLC7A5P2-201ENST00000553010 536 ntBASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGB4Q9UN71 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB4Q9UN71 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms