Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 AC005229.4-201ENST00000610085 2198 ntBASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 CYP21A1P-202ENST00000354927 1481 ntBASIC13.04□□□□□ -0.32
LINC00474Q9P2X8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 MKRN4P-201ENST00000444706 1521 ntBASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 KRT18P68-201ENST00000392293 1000 ntBASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 AC105036.2-201ENST00000569468 176 ntBASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 AC016405.3-201ENST00000607710 860 ntBASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 AL020996.1-203ENST00000536896 2307 ntBASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00474Q9P2X8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.02□□□□□ -0.32
LINC00474Q9P2X8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00474Q9P2X8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00474Q9P2X8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00474Q9P2X8 PLK5-205ENST00000642079 1969 ntBASIC13.02□□□□□ -0.32
LINC00474Q9P2X8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 GPX1P1-201ENST00000388829 606 ntBASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 LSM12P1-201ENST00000411836 588 ntBASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 RAP2CP1-201ENST00000605103 478 ntBASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 AL356652.1-201ENST00000615962 565 ntBASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 MIR2861-201ENST00000636310 90 ntBASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 AC010980.2-201ENST00000587099 1412 ntBASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00474Q9P2X8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LINC00474Q9P2X8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms