Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
TFCP2L1Q9NZI6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
TFCP2L1Q9NZI6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC25.6■■□□□ 1.69
TFCP2L1Q9NZI6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TFCP2L1Q9NZI6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TFCP2L1Q9NZI6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TFCP2L1Q9NZI6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TFCP2L1Q9NZI6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.6■■□□□ 1.69
TFCP2L1Q9NZI6 FSCN1P1-201ENST00000568912 1481 ntBASIC25.6■■□□□ 1.69
TFCP2L1Q9NZI6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.59■■□□□ 1.69
TFCP2L1Q9NZI6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC25.59■■□□□ 1.69
TFCP2L1Q9NZI6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
TFCP2L1Q9NZI6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TFCP2L1Q9NZI6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TFCP2L1Q9NZI6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
TFCP2L1Q9NZI6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC25.59■■□□□ 1.69
TFCP2L1Q9NZI6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.59■■□□□ 1.69
TFCP2L1Q9NZI6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.59■■□□□ 1.69
TFCP2L1Q9NZI6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TFCP2L1Q9NZI6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
TFCP2L1Q9NZI6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
TFCP2L1Q9NZI6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC25.58■■□□□ 1.69
TFCP2L1Q9NZI6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.58■■□□□ 1.69
TFCP2L1Q9NZI6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.58■■□□□ 1.69
TFCP2L1Q9NZI6 AP005242.2-201ENST00000580065 1175 ntBASIC25.58■■□□□ 1.69
TFCP2L1Q9NZI6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC25.58■■□□□ 1.69
TFCP2L1Q9NZI6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.58■■□□□ 1.69
TFCP2L1Q9NZI6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
TFCP2L1Q9NZI6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
TFCP2L1Q9NZI6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 MESTP1-201ENST00000404287 994 ntBASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 KRT18P48-201ENST00000434763 852 ntBASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 AC128688.1-201ENST00000487626 519 ntBASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
TFCP2L1Q9NZI6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TFCP2L1Q9NZI6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TFCP2L1Q9NZI6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.56■■□□□ 1.68
TFCP2L1Q9NZI6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
TFCP2L1Q9NZI6 AL031133.1-201ENST00000406807 723 ntBASIC25.56■■□□□ 1.68
TFCP2L1Q9NZI6 AC117947.1-201ENST00000427448 529 ntBASIC25.56■■□□□ 1.68
TFCP2L1Q9NZI6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC25.56■■□□□ 1.68
TFCP2L1Q9NZI6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC25.56■■□□□ 1.68
TFCP2L1Q9NZI6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC25.56■■□□□ 1.68
TFCP2L1Q9NZI6 MYC-208ENST00000641036 567 ntBASIC25.56■■□□□ 1.68
TFCP2L1Q9NZI6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.56■■□□□ 1.68
TFCP2L1Q9NZI6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TFCP2L1Q9NZI6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TFCP2L1Q9NZI6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 AC009947.2-201ENST00000444014 672 ntBASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 FAM87A-204ENST00000613235 858 ntBASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TFCP2L1Q9NZI6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 INGX-201ENST00000359239 846 ntBASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 SAPCD2P2-201ENST00000431719 1174 ntBASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.54■■□□□ 1.68
TFCP2L1Q9NZI6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TFCP2L1Q9NZI6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.53■■□□□ 1.68
TFCP2L1Q9NZI6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TFCP2L1Q9NZI6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms