Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 AC061975.6-201ENST00000579045 1553 ntBASIC17.25■□□□□ 0.35
IFT46Q9NQC8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 MIR4466-201ENST00000606121 54 ntBASIC17.25■□□□□ 0.35
IFT46Q9NQC8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.25■□□□□ 0.35
IFT46Q9NQC8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 AL035685.1-201ENST00000636663 812 ntBASIC17.24■□□□□ 0.35
IFT46Q9NQC8 AC105233.4-201ENST00000642045 216 ntBASIC17.24■□□□□ 0.35
IFT46Q9NQC8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFT46Q9NQC8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 AC053503.5-201ENST00000601508 636 ntBASIC17.23■□□□□ 0.35
IFT46Q9NQC8 AC233992.3-201ENST00000607491 485 ntBASIC17.23■□□□□ 0.35
IFT46Q9NQC8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.23■□□□□ 0.35
IFT46Q9NQC8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT46Q9NQC8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.22■□□□□ 0.35
IFT46Q9NQC8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.22■□□□□ 0.35
IFT46Q9NQC8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
IFT46Q9NQC8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFT46Q9NQC8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.22■□□□□ 0.35
IFT46Q9NQC8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFT46Q9NQC8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms