Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNMB3Q9NPA1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KCNMB3Q9NPA1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNMB3Q9NPA1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNMB3Q9NPA1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNMB3Q9NPA1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.6■■□□□ 1.21
KCNMB3Q9NPA1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.6■■□□□ 1.21
KCNMB3Q9NPA1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.6■■□□□ 1.21
KCNMB3Q9NPA1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNMB3Q9NPA1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.6■■□□□ 1.21
KCNMB3Q9NPA1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.6■■□□□ 1.21
KCNMB3Q9NPA1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 ESRRAP1-201ENST00000400596 1257 ntBASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNMB3Q9NPA1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 TSPY20P-201ENST00000450910 630 ntBASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 AC120498.8-201ENST00000614275 531 ntBASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KCNMB3Q9NPA1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
KCNMB3Q9NPA1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
KCNMB3Q9NPA1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
KCNMB3Q9NPA1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
KCNMB3Q9NPA1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
KCNMB3Q9NPA1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.58■■□□□ 1.2
KCNMB3Q9NPA1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
KCNMB3Q9NPA1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.2
KCNMB3Q9NPA1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.58■■□□□ 1.2
KCNMB3Q9NPA1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 POU5F1P3-201ENST00000428824 1078 ntBASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 AC008687.6-201ENST00000596318 630 ntBASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KCNMB3Q9NPA1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 AC099778.1-201ENST00000568593 1911 ntBASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
KCNMB3Q9NPA1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms