Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.11■□□□□ 0.65
PIF1Q9H611 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PIF1Q9H611 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PIF1Q9H611 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
PIF1Q9H611 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PIF1Q9H611 AC123595.1-201ENST00000440769 1046 ntBASIC19.11■□□□□ 0.65
PIF1Q9H611 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.11■□□□□ 0.65
PIF1Q9H611 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.11■□□□□ 0.65
PIF1Q9H611 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.11■□□□□ 0.65
PIF1Q9H611 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PIF1Q9H611 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PIF1Q9H611 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PIF1Q9H611 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
PIF1Q9H611 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PIF1Q9H611 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PIF1Q9H611 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.11■□□□□ 0.65
PIF1Q9H611 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PIF1Q9H611 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PIF1Q9H611 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
PIF1Q9H611 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PIF1Q9H611 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.1■□□□□ 0.65
PIF1Q9H611 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PIF1Q9H611 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PIF1Q9H611 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 AP000974.1-201ENST00000623909 2387 ntBASIC19.1■□□□□ 0.65
PIF1Q9H611 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.1■□□□□ 0.65
PIF1Q9H611 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.1■□□□□ 0.65
PIF1Q9H611 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.1■□□□□ 0.65
PIF1Q9H611 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.1■□□□□ 0.65
PIF1Q9H611 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PIF1Q9H611 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PIF1Q9H611 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.1■□□□□ 0.65
PIF1Q9H611 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PIF1Q9H611 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.1■□□□□ 0.65
PIF1Q9H611 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.09■□□□□ 0.65
PIF1Q9H611 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
PIF1Q9H611 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.09■□□□□ 0.65
PIF1Q9H611 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
PIF1Q9H611 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.09■□□□□ 0.65
PIF1Q9H611 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PIF1Q9H611 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PIF1Q9H611 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.09■□□□□ 0.65
PIF1Q9H611 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.09■□□□□ 0.65
PIF1Q9H611 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PIF1Q9H611 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.08■□□□□ 0.65
PIF1Q9H611 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PIF1Q9H611 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PIF1Q9H611 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PIF1Q9H611 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PIF1Q9H611 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.08■□□□□ 0.65
PIF1Q9H611 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PIF1Q9H611 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PIF1Q9H611 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PIF1Q9H611 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PIF1Q9H611 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.08■□□□□ 0.64
PIF1Q9H611 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PIF1Q9H611 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.08■□□□□ 0.64
PIF1Q9H611 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PIF1Q9H611 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PIF1Q9H611 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PIF1Q9H611 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PIF1Q9H611 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PIF1Q9H611 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.08■□□□□ 0.64
PIF1Q9H611 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PIF1Q9H611 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PIF1Q9H611 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PIF1Q9H611 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms