Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDT1Q9H211 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDT1Q9H211 RPPH1-201ENST00000516869 333 ntBASIC21.78■■□□□ 1.08
CDT1Q9H211 C1QBPP2-201ENST00000528754 825 ntBASIC21.78■■□□□ 1.08
CDT1Q9H211 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.78■■□□□ 1.08
CDT1Q9H211 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.78■■□□□ 1.08
CDT1Q9H211 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDT1Q9H211 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.78■■□□□ 1.08
CDT1Q9H211 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.78■■□□□ 1.08
CDT1Q9H211 AC066615.1-201ENST00000640911 628 ntBASIC21.78■■□□□ 1.08
CDT1Q9H211 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDT1Q9H211 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CDT1Q9H211 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDT1Q9H211 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDT1Q9H211 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CDT1Q9H211 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDT1Q9H211 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDT1Q9H211 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDT1Q9H211 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDT1Q9H211 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.77■■□□□ 1.08
CDT1Q9H211 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.77■■□□□ 1.08
CDT1Q9H211 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDT1Q9H211 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.77■■□□□ 1.08
CDT1Q9H211 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDT1Q9H211 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDT1Q9H211 AP005212.1-201ENST00000581547 1997 ntBASIC21.77■■□□□ 1.08
CDT1Q9H211 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDT1Q9H211 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDT1Q9H211 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CDT1Q9H211 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDT1Q9H211 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDT1Q9H211 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDT1Q9H211 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDT1Q9H211 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.76■■□□□ 1.07
CDT1Q9H211 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDT1Q9H211 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDT1Q9H211 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDT1Q9H211 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDT1Q9H211 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.76■■□□□ 1.07
CDT1Q9H211 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDT1Q9H211 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDT1Q9H211 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDT1Q9H211 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.76■■□□□ 1.07
CDT1Q9H211 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.76■■□□□ 1.07
CDT1Q9H211 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.76■■□□□ 1.07
CDT1Q9H211 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.76■■□□□ 1.07
CDT1Q9H211 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDT1Q9H211 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDT1Q9H211 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.75■■□□□ 1.07
CDT1Q9H211 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.75■■□□□ 1.07
CDT1Q9H211 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDT1Q9H211 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDT1Q9H211 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDT1Q9H211 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.75■■□□□ 1.07
CDT1Q9H211 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDT1Q9H211 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDT1Q9H211 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.75■■□□□ 1.07
CDT1Q9H211 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDT1Q9H211 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.75■■□□□ 1.07
CDT1Q9H211 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDT1Q9H211 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.75■■□□□ 1.07
CDT1Q9H211 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDT1Q9H211 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDT1Q9H211 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
CDT1Q9H211 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDT1Q9H211 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
CDT1Q9H211 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDT1Q9H211 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
CDT1Q9H211 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDT1Q9H211 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 FEM1AP1-201ENST00000431297 1995 ntBASIC21.74■■□□□ 1.07
CDT1Q9H211 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.74■■□□□ 1.07
CDT1Q9H211 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.74■■□□□ 1.07
CDT1Q9H211 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CDT1Q9H211 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.74■■□□□ 1.07
CDT1Q9H211 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CDT1Q9H211 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.74■■□□□ 1.07
CDT1Q9H211 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CDT1Q9H211 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.74■■□□□ 1.07
CDT1Q9H211 AL023875.1-201ENST00000640777 796 ntBASIC21.74■■□□□ 1.07
CDT1Q9H211 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
CDT1Q9H211 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CDT1Q9H211 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDT1Q9H211 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.74■■□□□ 1.07
CDT1Q9H211 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDT1Q9H211 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDT1Q9H211 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDT1Q9H211 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms