Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 AC137761.2-201ENST00000561729 223 ntBASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 AC145350.3-201ENST00000569033 163 ntBASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRDL1Q9BU40 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRDL1Q9BU40 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRDL1Q9BU40 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CHRDL1Q9BU40 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHRDL1Q9BU40 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRDL1Q9BU40 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CHRDL1Q9BU40 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CHRDL1Q9BU40 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CHRDL1Q9BU40 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRDL1Q9BU40 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.87■□□□□ 0.13
CHRDL1Q9BU40 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CHRDL1Q9BU40 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms