Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC013268.1-206ENST00000638368 961 ntBASIC20.06■□□□□ 0.8
CPNE1Q99829 AC112229.1-201ENST00000639295 961 ntBASIC20.06■□□□□ 0.8
CPNE1Q99829 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE1Q99829 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.06■□□□□ 0.8
CPNE1Q99829 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE1Q99829 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE1Q99829 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CPNE1Q99829 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CPNE1Q99829 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE1Q99829 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE1Q99829 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE1Q99829 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE1Q99829 AC116562.4-201ENST00000641316 2276 ntBASIC20.05■□□□□ 0.8
CPNE1Q99829 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CPNE1Q99829 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CPNE1Q99829 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE1Q99829 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE1Q99829 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE1Q99829 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
CPNE1Q99829 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE1Q99829 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE1Q99829 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CPNE1Q99829 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CPNE1Q99829 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CPNE1Q99829 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CPNE1Q99829 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE1Q99829 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE1Q99829 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE1Q99829 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE1Q99829 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.05■□□□□ 0.8
CPNE1Q99829 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE1Q99829 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE1Q99829 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CPNE1Q99829 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE1Q99829 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE1Q99829 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE1Q99829 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE1Q99829 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CPNE1Q99829 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CPNE1Q99829 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE1Q99829 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE1Q99829 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE1Q99829 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE1Q99829 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE1Q99829 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE1Q99829 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.04■□□□□ 0.8
CPNE1Q99829 AC016405.3-201ENST00000607710 860 ntBASIC20.04■□□□□ 0.8
CPNE1Q99829 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CPNE1Q99829 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE1Q99829 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CPNE1Q99829 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE1Q99829 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE1Q99829 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE1Q99829 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE1Q99829 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE1Q99829 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CPNE1Q99829 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE1Q99829 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.03■□□□□ 0.8
CPNE1Q99829 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.03■□□□□ 0.8
CPNE1Q99829 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE1Q99829 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CPNE1Q99829 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE1Q99829 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
CPNE1Q99829 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CPNE1Q99829 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE1Q99829 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE1Q99829 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE1Q99829 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.02■□□□□ 0.8
CPNE1Q99829 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.02■□□□□ 0.8
CPNE1Q99829 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE1Q99829 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.02■□□□□ 0.8
CPNE1Q99829 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE1Q99829 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CPNE1Q99829 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE1Q99829 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE1Q99829 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.02■□□□□ 0.8
CPNE1Q99829 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CPNE1Q99829 PTBP1P-201ENST00000554374 1601 ntBASIC20.02■□□□□ 0.79
CPNE1Q99829 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.02■□□□□ 0.79
CPNE1Q99829 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE1Q99829 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE1Q99829 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE1Q99829 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CPNE1Q99829 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CPNE1Q99829 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE1Q99829 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE1Q99829 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms