Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.23■□□□□ 0.99
TRIM11Q96F44 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM11Q96F44 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM11Q96F44 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
TRIM11Q96F44 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM11Q96F44 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TRIM11Q96F44 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM11Q96F44 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM11Q96F44 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TRIM11Q96F44 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM11Q96F44 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM11Q96F44 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TRIM11Q96F44 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM11Q96F44 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM11Q96F44 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM11Q96F44 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
TRIM11Q96F44 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TRIM11Q96F44 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM11Q96F44 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM11Q96F44 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
TRIM11Q96F44 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.22■□□□□ 0.99
TRIM11Q96F44 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM11Q96F44 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRIM11Q96F44 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM11Q96F44 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.22■□□□□ 0.99
TRIM11Q96F44 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM11Q96F44 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TRIM11Q96F44 PTBP1P-201ENST00000554374 1601 ntBASIC21.22■□□□□ 0.99
TRIM11Q96F44 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM11Q96F44 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM11Q96F44 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM11Q96F44 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM11Q96F44 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM11Q96F44 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM11Q96F44 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM11Q96F44 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIM11Q96F44 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM11Q96F44 AC022517.1-201ENST00000592429 346 ntBASIC21.21■□□□□ 0.99
TRIM11Q96F44 AL589743.5-201ENST00000616611 1050 ntBASIC21.21■□□□□ 0.99
TRIM11Q96F44 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM11Q96F44 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM11Q96F44 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM11Q96F44 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM11Q96F44 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM11Q96F44 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM11Q96F44 AL691432.2-201ENST00000607222 2038 ntBASIC21.21■□□□□ 0.99
TRIM11Q96F44 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM11Q96F44 KRT8P17-201ENST00000453110 1448 ntBASIC21.21■□□□□ 0.99
TRIM11Q96F44 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.2■□□□□ 0.99
TRIM11Q96F44 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.2■□□□□ 0.99
TRIM11Q96F44 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TRIM11Q96F44 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRIM11Q96F44 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM11Q96F44 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRIM11Q96F44 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM11Q96F44 AL031963.3-201ENST00000606441 850 ntBASIC21.2■□□□□ 0.98
TRIM11Q96F44 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM11Q96F44 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRIM11Q96F44 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.2■□□□□ 0.98
TRIM11Q96F44 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TRIM11Q96F44 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.2■□□□□ 0.98
TRIM11Q96F44 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM11Q96F44 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM11Q96F44 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.19■□□□□ 0.98
TRIM11Q96F44 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM11Q96F44 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM11Q96F44 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM11Q96F44 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.19■□□□□ 0.98
TRIM11Q96F44 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRIM11Q96F44 AL512625.2-201ENST00000417533 625 ntBASIC21.19■□□□□ 0.98
TRIM11Q96F44 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.19■□□□□ 0.98
TRIM11Q96F44 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.19■□□□□ 0.98
TRIM11Q96F44 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
TRIM11Q96F44 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRIM11Q96F44 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM11Q96F44 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM11Q96F44 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM11Q96F44 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
TRIM11Q96F44 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM11Q96F44 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM11Q96F44 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM11Q96F44 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM11Q96F44 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM11Q96F44 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM11Q96F44 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM11Q96F44 KRT8P20-201ENST00000423953 1409 ntBASIC21.19■□□□□ 0.98
TRIM11Q96F44 AC010980.2-201ENST00000587099 1412 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms