Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NCLNQ969V3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLNQ969V3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLNQ969V3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLNQ969V3 AL512408.1-201ENST00000569378 2000 ntBASIC19.42■□□□□ 0.7
NCLNQ969V3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCLNQ969V3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NCLNQ969V3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NCLNQ969V3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLNQ969V3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLNQ969V3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLNQ969V3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLNQ969V3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLNQ969V3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.41■□□□□ 0.7
NCLNQ969V3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLNQ969V3 AC245052.3-201ENST00000450182 901 ntBASIC19.41■□□□□ 0.7
NCLNQ969V3 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.41■□□□□ 0.7
NCLNQ969V3 AC005181.1-201ENST00000604782 1256 ntBASIC19.41■□□□□ 0.7
NCLNQ969V3 AC243732.1-201ENST00000612648 864 ntBASIC19.41■□□□□ 0.7
NCLNQ969V3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLNQ969V3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NCLNQ969V3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLNQ969V3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLNQ969V3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLNQ969V3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.41■□□□□ 0.7
NCLNQ969V3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLNQ969V3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLNQ969V3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.4■□□□□ 0.7
NCLNQ969V3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 AC007322.4-201ENST00000509611 723 ntBASIC19.4■□□□□ 0.7
NCLNQ969V3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.4■□□□□ 0.7
NCLNQ969V3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
NCLNQ969V3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCLNQ969V3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.39■□□□□ 0.7
NCLNQ969V3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NCLNQ969V3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NCLNQ969V3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.39■□□□□ 0.69
NCLNQ969V3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLNQ969V3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLNQ969V3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLNQ969V3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.39■□□□□ 0.69
NCLNQ969V3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NCLNQ969V3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.39■□□□□ 0.69
NCLNQ969V3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLNQ969V3 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.39■□□□□ 0.69
NCLNQ969V3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
NCLNQ969V3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLNQ969V3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NCLNQ969V3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLNQ969V3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NCLNQ969V3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NCLNQ969V3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.39■□□□□ 0.69
NCLNQ969V3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCLNQ969V3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.39■□□□□ 0.69
NCLNQ969V3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NCLNQ969V3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NCLNQ969V3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.38■□□□□ 0.69
NCLNQ969V3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCLNQ969V3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCLNQ969V3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.38■□□□□ 0.69
NCLNQ969V3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
NCLNQ969V3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.38■□□□□ 0.69
NCLNQ969V3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.38■□□□□ 0.69
NCLNQ969V3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NCLNQ969V3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NCLNQ969V3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.38■□□□□ 0.69
NCLNQ969V3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NCLNQ969V3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NCLNQ969V3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCLNQ969V3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.37■□□□□ 0.69
NCLNQ969V3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NCLNQ969V3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCLNQ969V3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NCLNQ969V3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCLNQ969V3 AC068338.2-201ENST00000563278 1430 ntBASIC19.37■□□□□ 0.69
NCLNQ969V3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.37■□□□□ 0.69
NCLNQ969V3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.37■□□□□ 0.69
NCLNQ969V3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCLNQ969V3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NCLNQ969V3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.37■□□□□ 0.69
NCLNQ969V3 AL050303.2-201ENST00000619798 666 ntBASIC19.37■□□□□ 0.69
NCLNQ969V3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCLNQ969V3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NCLNQ969V3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCLNQ969V3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms