Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SNX21Q969T3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNX21Q969T3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SNX21Q969T3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNX21Q969T3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SNX21Q969T3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.81■■□□□ 1.4
SNX21Q969T3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.81■■□□□ 1.4
SNX21Q969T3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.81■■□□□ 1.4
SNX21Q969T3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SNX21Q969T3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SNX21Q969T3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNX21Q969T3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNX21Q969T3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.81■■□□□ 1.4
SNX21Q969T3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SNX21Q969T3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.8■■□□□ 1.4
SNX21Q969T3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNX21Q969T3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.8■■□□□ 1.4
SNX21Q969T3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.8■■□□□ 1.4
SNX21Q969T3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNX21Q969T3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNX21Q969T3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNX21Q969T3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.8■■□□□ 1.4
SNX21Q969T3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.8■■□□□ 1.4
SNX21Q969T3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
SNX21Q969T3 AL356652.1-201ENST00000615962 565 ntBASIC23.8■■□□□ 1.4
SNX21Q969T3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNX21Q969T3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNX21Q969T3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNX21Q969T3 PTBP1P-201ENST00000554374 1601 ntBASIC23.8■■□□□ 1.4
SNX21Q969T3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SNX21Q969T3 AC019069.1-201ENST00000610008 1333 ntBASIC23.8■■□□□ 1.4
SNX21Q969T3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
SNX21Q969T3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SNX21Q969T3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNX21Q969T3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SNX21Q969T3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SNX21Q969T3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNX21Q969T3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SNX21Q969T3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.79■■□□□ 1.4
SNX21Q969T3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SNX21Q969T3 AC087633.2-202ENST00000565166 1439 ntBASIC23.79■■□□□ 1.4
SNX21Q969T3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNX21Q969T3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.79■■□□□ 1.4
SNX21Q969T3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
SNX21Q969T3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNX21Q969T3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SNX21Q969T3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNX21Q969T3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SNX21Q969T3 LINC02228-203ENST00000641970 1355 ntBASIC23.78■■□□□ 1.4
SNX21Q969T3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SNX21Q969T3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNX21Q969T3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SNX21Q969T3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SNX21Q969T3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.78■■□□□ 1.4
SNX21Q969T3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.78■■□□□ 1.4
SNX21Q969T3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNX21Q969T3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNX21Q969T3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNX21Q969T3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX21Q969T3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SNX21Q969T3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SNX21Q969T3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX21Q969T3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX21Q969T3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX21Q969T3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX21Q969T3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX21Q969T3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SNX21Q969T3 AC097381.1-201ENST00000429019 1296 ntBASIC23.77■■□□□ 1.4
SNX21Q969T3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.77■■□□□ 1.4
SNX21Q969T3 CDV3P1-201ENST00000471403 739 ntBASIC23.77■■□□□ 1.4
SNX21Q969T3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.77■■□□□ 1.4
SNX21Q969T3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SNX21Q969T3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.77■■□□□ 1.4
SNX21Q969T3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX21Q969T3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.77■■□□□ 1.4
SNX21Q969T3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SNX21Q969T3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX21Q969T3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX21Q969T3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNX21Q969T3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SNX21Q969T3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.76■■□□□ 1.39
SNX21Q969T3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.76■■□□□ 1.39
SNX21Q969T3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.76■■□□□ 1.39
SNX21Q969T3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.76■■□□□ 1.39
SNX21Q969T3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.76■■□□□ 1.39
SNX21Q969T3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SNX21Q969T3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.76■■□□□ 1.39
SNX21Q969T3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX21Q969T3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SNX21Q969T3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.76■■□□□ 1.39
SNX21Q969T3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SNX21Q969T3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.76■■□□□ 1.39
SNX21Q969T3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX21Q969T3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.76■■□□□ 1.39
SNX21Q969T3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.76■■□□□ 1.39
SNX21Q969T3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX21Q969T3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX21Q969T3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX21Q969T3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNX21Q969T3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms