Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF2Q8TEC5 PLK5-205ENST00000642079 1969 ntBASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF2Q8TEC5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF2Q8TEC5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 AC124283.5-201ENST00000624661 1809 ntBASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 RPS2P55-201ENST00000397318 883 ntBASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 AC012618.2-201ENST00000428058 849 ntBASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 AC107956.1-201ENST00000494359 873 ntBASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 PRKY-204ENST00000533551 1019 ntBASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.84■□□□□ 0.93
SH3RF2Q8TEC5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 AC233702.5-201ENST00000584107 538 ntBASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF2Q8TEC5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.83■□□□□ 0.92
SH3RF2Q8TEC5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.83■□□□□ 0.92
SH3RF2Q8TEC5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.83■□□□□ 0.92
SH3RF2Q8TEC5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SH3RF2Q8TEC5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 AL121603.2-201ENST00000557373 2117 ntBASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms