Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 AL391422.3-201ENST00000603791 2761 ntBASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.23■□□□□ 0.83
LPCAT1Q8NF37 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 AL162377.1-201ENST00000618844 1793 ntBASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.22■□□□□ 0.83
LPCAT1Q8NF37 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 AL031963.3-201ENST00000606441 850 ntBASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 AC092368.3-202ENST00000574180 1591 ntBASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
LPCAT1Q8NF37 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
LPCAT1Q8NF37 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT1Q8NF37 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.2■□□□□ 0.82
LPCAT1Q8NF37 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT1Q8NF37 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT1Q8NF37 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT1Q8NF37 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT1Q8NF37 RNA5SP413-201ENST00000516373 109 ntBASIC20.2■□□□□ 0.82
LPCAT1Q8NF37 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.2■□□□□ 0.82
LPCAT1Q8NF37 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT1Q8NF37 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms