Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 PGM5P4-201ENST00000421970 445 ntBASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 AL356652.1-201ENST00000615962 565 ntBASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 AC231657.2-201ENST00000624556 255 ntBASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF439Q8NDP4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 AC100791.3-201ENST00000617619 330 ntBASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 AC092437.1-201ENST00000624794 1048 ntBASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF439Q8NDP4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 AC099778.1-201ENST00000568593 1911 ntBASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 CYP2T1P-201ENST00000432607 1285 ntBASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF439Q8NDP4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF439Q8NDP4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF439Q8NDP4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF439Q8NDP4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.58■□□□□ 0.25
ZNF439Q8NDP4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.58■□□□□ 0.25
ZNF439Q8NDP4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 MIR935-201ENST00000401179 91 ntBASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF439Q8NDP4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF439Q8NDP4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ZNF439Q8NDP4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms