Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 UBE2SP1-201ENST00000450587 669 ntBASIC20.52■□□□□ 0.88
KDM1BQ8NB78 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 AL359736.2-201ENST00000621992 437 ntBASIC20.52■□□□□ 0.88
KDM1BQ8NB78 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
KDM1BQ8NB78 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
KDM1BQ8NB78 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
KDM1BQ8NB78 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
KDM1BQ8NB78 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.52■□□□□ 0.87
KDM1BQ8NB78 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 AL158047.1-201ENST00000445918 881 ntBASIC20.51■□□□□ 0.87
KDM1BQ8NB78 AC093827.2-201ENST00000512654 315 ntBASIC20.51■□□□□ 0.87
KDM1BQ8NB78 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 AC092667.1-201ENST00000434301 2586 ntBASIC20.51■□□□□ 0.87
KDM1BQ8NB78 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.51■□□□□ 0.87
KDM1BQ8NB78 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 RPPH1-201ENST00000516869 333 ntBASIC20.5■□□□□ 0.87
KDM1BQ8NB78 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KDM1BQ8NB78 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 PLK5-205ENST00000642079 1969 ntBASIC20.49■□□□□ 0.87
KDM1BQ8NB78 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KDM1BQ8NB78 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDM1BQ8NB78 AC006128.1-201ENST00000624704 1661 ntBASIC20.48■□□□□ 0.87
KDM1BQ8NB78 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KDM1BQ8NB78 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.48■□□□□ 0.87
KDM1BQ8NB78 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
KDM1BQ8NB78 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.48■□□□□ 0.87
KDM1BQ8NB78 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDM1BQ8NB78 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KDM1BQ8NB78 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.48■□□□□ 0.87
KDM1BQ8NB78 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.48■□□□□ 0.87
KDM1BQ8NB78 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms