Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.3■■□□□ 1.16
DHX40Q8IX18 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
DHX40Q8IX18 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DHX40Q8IX18 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.3■■□□□ 1.16
DHX40Q8IX18 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.3■■□□□ 1.16
DHX40Q8IX18 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DHX40Q8IX18 KRT18P20-201ENST00000548986 1279 ntBASIC22.3■■□□□ 1.16
DHX40Q8IX18 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.3■■□□□ 1.16
DHX40Q8IX18 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.3■■□□□ 1.16
DHX40Q8IX18 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DHX40Q8IX18 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DHX40Q8IX18 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
DHX40Q8IX18 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
DHX40Q8IX18 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
DHX40Q8IX18 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
DHX40Q8IX18 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DHX40Q8IX18 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
DHX40Q8IX18 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.29■■□□□ 1.16
DHX40Q8IX18 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DHX40Q8IX18 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DHX40Q8IX18 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.29■■□□□ 1.16
DHX40Q8IX18 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
DHX40Q8IX18 FAM21FP-204ENST00000608637 956 ntBASIC22.29■■□□□ 1.16
DHX40Q8IX18 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.29■■□□□ 1.16
DHX40Q8IX18 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DHX40Q8IX18 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DHX40Q8IX18 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
DHX40Q8IX18 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.29■■□□□ 1.16
DHX40Q8IX18 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.29■■□□□ 1.16
DHX40Q8IX18 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DHX40Q8IX18 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DHX40Q8IX18 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 Z82202.1-201ENST00000623446 1880 ntBASIC22.28■■□□□ 1.16
DHX40Q8IX18 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DHX40Q8IX18 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DHX40Q8IX18 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
DHX40Q8IX18 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DHX40Q8IX18 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DHX40Q8IX18 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
DHX40Q8IX18 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
DHX40Q8IX18 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DHX40Q8IX18 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DHX40Q8IX18 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.28■■□□□ 1.16
DHX40Q8IX18 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DHX40Q8IX18 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.27■■□□□ 1.16
DHX40Q8IX18 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
DHX40Q8IX18 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
DHX40Q8IX18 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DHX40Q8IX18 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DHX40Q8IX18 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
DHX40Q8IX18 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
DHX40Q8IX18 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.27■■□□□ 1.16
DHX40Q8IX18 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
DHX40Q8IX18 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.27■■□□□ 1.16
DHX40Q8IX18 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.27■■□□□ 1.16
DHX40Q8IX18 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.27■■□□□ 1.16
DHX40Q8IX18 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.27■■□□□ 1.16
DHX40Q8IX18 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
DHX40Q8IX18 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.27■■□□□ 1.16
DHX40Q8IX18 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
DHX40Q8IX18 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
DHX40Q8IX18 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DHX40Q8IX18 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 LINC02228-203ENST00000641970 1355 ntBASIC22.26■■□□□ 1.15
DHX40Q8IX18 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DHX40Q8IX18 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DHX40Q8IX18 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DHX40Q8IX18 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
DHX40Q8IX18 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 AC034268.1-201ENST00000441047 882 ntBASIC22.26■■□□□ 1.15
DHX40Q8IX18 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DHX40Q8IX18 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DHX40Q8IX18 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DHX40Q8IX18 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DHX40Q8IX18 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.26■■□□□ 1.15
DHX40Q8IX18 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms