Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CDHR3Q6ZTQ4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CDHR3Q6ZTQ4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDHR3Q6ZTQ4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 AC007322.1-201ENST00000426983 750 ntBASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 CNN2P6-201ENST00000439038 900 ntBASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.14■□□□□ 0.81
CDHR3Q6ZTQ4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 HLA-L-209ENST00000420110 1011 ntBASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.13■□□□□ 0.81
CDHR3Q6ZTQ4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 AC018445.3-201ENST00000624177 1945 ntBASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR3Q6ZTQ4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 DPP3P2-201ENST00000416030 1696 ntBASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 TERF1P5-201ENST00000477545 1207 ntBASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 AC005181.1-201ENST00000604782 1256 ntBASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 AL050303.2-201ENST00000619798 666 ntBASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.11■□□□□ 0.81
CDHR3Q6ZTQ4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.1■□□□□ 0.81
CDHR3Q6ZTQ4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDHR3Q6ZTQ4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.1■□□□□ 0.81
CDHR3Q6ZTQ4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDHR3Q6ZTQ4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDHR3Q6ZTQ4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms