Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CDC42BPAQ5VT25 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CDC42BPAQ5VT25 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC30.63■■■□□ 2.49
CDC42BPAQ5VT25 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC30.63■■■□□ 2.49
CDC42BPAQ5VT25 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CDC42BPAQ5VT25 MYB-221ENST00000527615 2381 ntTSL 5 BASIC30.62■■■□□ 2.49
CDC42BPAQ5VT25 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CDC42BPAQ5VT25 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CDC42BPAQ5VT25 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CDC42BPAQ5VT25 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
CDC42BPAQ5VT25 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CDC42BPAQ5VT25 AC073508.3-201ENST00000619697 1419 ntBASIC30.62■■■□□ 2.49
CDC42BPAQ5VT25 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CDC42BPAQ5VT25 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC30.62■■■□□ 2.49
CDC42BPAQ5VT25 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC30.62■■■□□ 2.49
CDC42BPAQ5VT25 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 FITM1-202ENST00000559294 800 ntBASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 AL049597.2-201ENST00000565575 961 ntBASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 KRT8P20-201ENST00000423953 1409 ntBASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 MESTP1-201ENST00000404287 994 ntBASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC30.61■■■□□ 2.49
CDC42BPAQ5VT25 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 YBX1P10-201ENST00000444752 975 ntBASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 ABBA01031674.1-201ENST00000635145 728 ntBASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 AL121603.2-201ENST00000557373 2117 ntBASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC30.6■■■□□ 2.49
CDC42BPAQ5VT25 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 LINC01568-207ENST00000641790 1380 ntBASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CDC42BPAQ5VT25 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC30.58■■■□□ 2.49
CDC42BPAQ5VT25 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC30.58■■■□□ 2.49
CDC42BPAQ5VT25 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC30.58■■■□□ 2.49
CDC42BPAQ5VT25 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
CDC42BPAQ5VT25 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC30.58■■■□□ 2.49
CDC42BPAQ5VT25 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CDC42BPAQ5VT25 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC30.57■■■□□ 2.48
CDC42BPAQ5VT25 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CDC42BPAQ5VT25 CALM3-202ENST00000391918 702 ntTSL 2 BASIC30.57■■■□□ 2.48
CDC42BPAQ5VT25 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC30.57■■■□□ 2.48
CDC42BPAQ5VT25 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC30.57■■■□□ 2.48
CDC42BPAQ5VT25 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CDC42BPAQ5VT25 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CDC42BPAQ5VT25 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC30.57■■■□□ 2.48
CDC42BPAQ5VT25 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
CDC42BPAQ5VT25 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC30.55■■■□□ 2.48
CDC42BPAQ5VT25 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC30.55■■■□□ 2.48
CDC42BPAQ5VT25 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC30.55■■■□□ 2.48
CDC42BPAQ5VT25 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC30.55■■■□□ 2.48
CDC42BPAQ5VT25 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CDC42BPAQ5VT25 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CDC42BPAQ5VT25 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
CDC42BPAQ5VT25 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms