Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC33.09■■■□□ 2.89
SNAPC4Q5SXM2 AC128688.1-201ENST00000487626 519 ntBASIC33.09■■■□□ 2.89
SNAPC4Q5SXM2 YBX1P2-201ENST00000489612 999 ntBASIC33.09■■■□□ 2.89
SNAPC4Q5SXM2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC33.09■■■□□ 2.89
SNAPC4Q5SXM2 AC139887.4-201ENST00000607877 719 ntBASIC33.09■■■□□ 2.89
SNAPC4Q5SXM2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC33.09■■■□□ 2.89
SNAPC4Q5SXM2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SNAPC4Q5SXM2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC33.08■■■□□ 2.89
SNAPC4Q5SXM2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC33.08■■■□□ 2.89
SNAPC4Q5SXM2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC33.08■■■□□ 2.89
SNAPC4Q5SXM2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SNAPC4Q5SXM2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC33.07■■■□□ 2.88
SNAPC4Q5SXM2 HMGA1P5-201ENST00000412453 271 ntBASIC33.07■■■□□ 2.88
SNAPC4Q5SXM2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
SNAPC4Q5SXM2 AC011506.1-201ENST00000474329 610 ntBASIC33.07■■■□□ 2.88
SNAPC4Q5SXM2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC33.07■■■□□ 2.88
SNAPC4Q5SXM2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC33.07■■■□□ 2.88
SNAPC4Q5SXM2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC33.07■■■□□ 2.88
SNAPC4Q5SXM2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SNAPC4Q5SXM2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC33.07■■■□□ 2.88
SNAPC4Q5SXM2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SNAPC4Q5SXM2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
SNAPC4Q5SXM2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
SNAPC4Q5SXM2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC33.06■■■□□ 2.88
SNAPC4Q5SXM2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
SNAPC4Q5SXM2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
SNAPC4Q5SXM2 KRT8P36-201ENST00000489121 1440 ntBASIC33.06■■■□□ 2.88
SNAPC4Q5SXM2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
SNAPC4Q5SXM2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
SNAPC4Q5SXM2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC33.06■■■□□ 2.88
SNAPC4Q5SXM2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
SNAPC4Q5SXM2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 C1orf229-201ENST00000623686 2258 ntBASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 PTBP1P-201ENST00000554374 1601 ntBASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 RNF152P1-201ENST00000397754 604 ntBASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 FAM86EP-206ENST00000510506 987 ntBASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC33.05■■■□□ 2.88
SNAPC4Q5SXM2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 FAM207BP-201ENST00000447172 505 ntBASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 AL121956.5-201ENST00000625261 221 ntBASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SNAPC4Q5SXM2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SNAPC4Q5SXM2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SNAPC4Q5SXM2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SNAPC4Q5SXM2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
SNAPC4Q5SXM2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC33.03■■■□□ 2.88
SNAPC4Q5SXM2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC33.03■■■□□ 2.88
SNAPC4Q5SXM2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC33.03■■■□□ 2.88
SNAPC4Q5SXM2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SNAPC4Q5SXM2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SNAPC4Q5SXM2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SNAPC4Q5SXM2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SNAPC4Q5SXM2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC33.02■■■□□ 2.88
SNAPC4Q5SXM2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
SNAPC4Q5SXM2 PCED1CP-201ENST00000419887 785 ntBASIC33.02■■■□□ 2.88
SNAPC4Q5SXM2 AC004980.1-204ENST00000429707 299 ntBASIC33.02■■■□□ 2.88
SNAPC4Q5SXM2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC33.02■■■□□ 2.88
SNAPC4Q5SXM2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC33.02■■■□□ 2.88
SNAPC4Q5SXM2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC33.02■■■□□ 2.88
SNAPC4Q5SXM2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC33.02■■■□□ 2.88
SNAPC4Q5SXM2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SNAPC4Q5SXM2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
SNAPC4Q5SXM2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC33.01■■■□□ 2.88
SNAPC4Q5SXM2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC33.01■■■□□ 2.88
SNAPC4Q5SXM2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
SNAPC4Q5SXM2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
SNAPC4Q5SXM2 AC097488.1-201ENST00000507834 756 ntBASIC33.01■■■□□ 2.88
SNAPC4Q5SXM2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC33.01■■■□□ 2.88
SNAPC4Q5SXM2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC33.01■■■□□ 2.88
SNAPC4Q5SXM2 AC093458.2-201ENST00000623150 629 ntBASIC33.01■■■□□ 2.88
SNAPC4Q5SXM2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC33.01■■■□□ 2.88
SNAPC4Q5SXM2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
SNAPC4Q5SXM2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.87
SNAPC4Q5SXM2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
SNAPC4Q5SXM2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
SNAPC4Q5SXM2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
SNAPC4Q5SXM2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC33■■■□□ 2.87
SNAPC4Q5SXM2 SLC25A1P4-201ENST00000567977 778 ntBASIC33■■■□□ 2.87
SNAPC4Q5SXM2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC33■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms