Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 MAPK8IP3-213ENST00000568271 752 ntTSL 513.89□□□□□ -0.191e-12■■□□□ 14.5
SRSF1Q07955 MAPK8IP3-214ENST00000568774 510 ntTSL 211.51□□□□□ -0.571e-12■■□□□ 14.5
SRSF1Q07955 MAPK8IP3-212ENST00000567849 551 ntTSL 55.51□□□□□ -1.531e-12■■□□□ 14.5
SRSF1Q07955 SRRT-214ENST00000614370 556 ntTSL 213.94□□□□□ -0.183e-7■■□□□ 14.5
SRSF1Q07955 SRRT-202ENST00000431645 397 ntTSL 211.56□□□□□ -0.563e-7■■□□□ 14.5
SRSF1Q07955 CHAF1A-205ENST00000587580 494 ntTSL 321.85■■□□□ 1.092e-8■■□□□ 14.5
SRSF1Q07955 CHAF1A-203ENST00000585854 499 ntTSL 220■□□□□ 0.792e-8■■□□□ 14.5
SRSF1Q07955 RBM14-209ENST00000512283 567 ntTSL 417.36■□□□□ 0.377e-11■■□□□ 14.5
SRSF1Q07955 TLK1-204ENST00000413010 603 ntTSL 516.62■□□□□ 0.252e-8■■□□□ 14.5
SRSF1Q07955 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.183e-10■■□□□ 14.5
SRSF1Q07955 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.17■□□□□ 0.183e-10■■□□□ 14.5
SRSF1Q07955 VAV2-204ENST00000472905 506 ntTSL 315.51■□□□□ 0.072e-8■■□□□ 14.5
SRSF1Q07955 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.39■□□□□ 0.053e-10■■□□□ 14.5
SRSF1Q07955 RBM14-RBM4-202ENST00000421355 2034 ntTSL 214.32□□□□□ -0.123e-10■■□□□ 14.5
SRSF1Q07955 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.152e-8■■□□□ 14.5
SRSF1Q07955 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.252e-8■■□□□ 14.5
SRSF1Q07955 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.41□□□□□ -0.262e-8■■□□□ 14.5
SRSF1Q07955 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC13.31□□□□□ -0.283e-10■■□□□ 14.5
SRSF1Q07955 TLK1-203ENST00000409443 2783 ntTSL 212.81□□□□□ -0.362e-8■■□□□ 14.5
SRSF1Q07955 VAV2-205ENST00000486113 523 ntTSL 212.42□□□□□ -0.422e-8■■□□□ 14.5
SRSF1Q07955 RBM14-205ENST00000443702 732 ntTSL 3 BASIC12.22□□□□□ -0.453e-10■■□□□ 14.5
SRSF1Q07955 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.483e-10■■□□□ 14.5
SRSF1Q07955 RBM14-RBM4-204ENST00000511114 523 ntTSL 411.48□□□□□ -0.573e-10■■□□□ 14.5
SRSF1Q07955 RBM14-203ENST00000409372 876 ntTSL 2 BASIC11.48□□□□□ -0.573e-10■■□□□ 14.5
SRSF1Q07955 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC10.72□□□□□ -0.692e-8■■□□□ 14.5
SRSF1Q07955 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.782e-8■■□□□ 14.5
SRSF1Q07955 TLK1-208ENST00000466220 346 ntTSL 49.5□□□□□ -0.892e-8■■□□□ 14.5
SRSF1Q07955 TLK1-201ENST00000359766 4321 ntTSL 58.48□□□□□ -1.052e-8■■□□□ 14.5
SRSF1Q07955 TLK1-209ENST00000470340 521 ntTSL 46.17□□□□□ -1.422e-8■■□□□ 14.5
SRSF1Q07955 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.12□□□□□ -1.752e-8■■□□□ 14.5
SRSF1Q07955 SLC2A4RG-203ENST00000474248 624 ntTSL 221.65■■□□□ 1.062e-7■■□□□ 14.5
SRSF1Q07955 SLC2A4RG-205ENST00000485897 518 ntTSL 521.08■□□□□ 0.972e-7■■□□□ 14.5
SRSF1Q07955 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.62□□□□□ -0.077e-8■■□□□ 14.5
SRSF1Q07955 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.487e-8■■□□□ 14.5
SRSF1Q07955 INPPL1-205ENST00000537755 535 ntTSL 410.3□□□□□ -0.762e-6■■□□□ 14.5
SRSF1Q07955 KMT2E-212ENST00000482560 1759 ntTSL 55.1□□□□□ -1.592e-7■■□□□ 14.4
SRSF1Q07955 PAH-212ENST00000551337 675 ntTSL 315.15■□□□□ 0.023e-10■■□□□ 14.4
SRSF1Q07955 ACAP3-208ENST00000472541 1946 ntTSL 516.53■□□□□ 0.249e-10■■□□□ 14.4
SRSF1Q07955 MGEA5-204ENST00000429860 769 ntTSL 310.22□□□□□ -0.778e-9■■□□□ 14.4
SRSF1Q07955 MGA-205ENST00000564190 3521 ntTSL 23.78□□□□□ -1.81e-7■■□□□ 14.4
SRSF1Q07955 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.861e-7■■□□□ 14.4
SRSF1Q07955 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.38□□□□□ -1.871e-7■■□□□ 14.4
SRSF1Q07955 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.871e-7■■□□□ 14.4
SRSF1Q07955 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.17□□□□□ -1.91e-7■■□□□ 14.4
SRSF1Q07955 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.424e-7■■□□□ 14.4
SRSF1Q07955 CDK5RAP3-236ENST00000584991 1862 ntTSL 512.4□□□□□ -0.424e-7■■□□□ 14.4
SRSF1Q07955 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC10.88□□□□□ -0.674e-7■■□□□ 14.4
SRSF1Q07955 CDK5RAP3-237ENST00000585163 2519 ntTSL 1 (best)10.82□□□□□ -0.684e-7■■□□□ 14.4
SRSF1Q07955 CDK5RAP3-217ENST00000580287 2609 ntTSL 1 (best)10.57□□□□□ -0.724e-7■■□□□ 14.4
SRSF1Q07955 CDK5RAP3-231ENST00000584063 2759 ntTSL 1 (best)9.93□□□□□ -0.824e-7■■□□□ 14.4
SRSF1Q07955 AC018521.1-202ENST00000641877 2655 ntBASIC9.6□□□□□ -0.874e-7■■□□□ 14.4
SRSF1Q07955 GSE1-206ENST00000438180 1741 ntTSL 1 (best)13.5□□□□□ -0.252e-7■■□□□ 14.4
SRSF1Q07955 GIGYF2-220ENST00000440945 2658 ntTSL 1 (best)7.36□□□□□ -1.231e-7■■□□□ 14.4
SRSF1Q07955 DNHD1-220ENST00000534210 2867 ntTSL 1 (best)11.09□□□□□ -0.638e-7■■□□□ 14.4
SRSF1Q07955 DNHD1-216ENST00000532027 4881 ntTSL 28.64□□□□□ -1.038e-7■■□□□ 14.4
SRSF1Q07955 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.342e-7■■□□□ 14.4
SRSF1Q07955 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.282e-7■■□□□ 14.4
SRSF1Q07955 TTLL3-228ENST00000483051 4176 ntTSL 57.03□□□□□ -1.283e-7■■□□□ 14.4
SRSF1Q07955 TTLL3-203ENST00000414814 549 ntTSL 513.17□□□□□ -0.38e-8■■□□□ 14.4
SRSF1Q07955 TTLL3-212ENST00000430718 536 ntTSL 413.17□□□□□ -0.38e-8■■□□□ 14.4
SRSF1Q07955 TTLL3-205ENST00000418745 540 ntTSL 412.37□□□□□ -0.438e-8■■□□□ 14.4
SRSF1Q07955 TTLL3-206ENST00000419081 591 ntTSL 512.04□□□□□ -0.488e-8■■□□□ 14.4
SRSF1Q07955 ARPC4-TTLL3-203ENST00000424442 903 ntTSL 511.31□□□□□ -0.68e-8■■□□□ 14.4
SRSF1Q07955 TTLL3-219ENST00000452597 603 ntTSL 411.31□□□□□ -0.68e-8■■□□□ 14.4
SRSF1Q07955 TTLL3-217ENST00000439814 497 ntTSL 410.16□□□□□ -0.788e-8■■□□□ 14.4
SRSF1Q07955 TTLL3-216ENST00000438596 540 ntTSL 58.57□□□□□ -1.048e-8■■□□□ 14.4
SRSF1Q07955 MAP3K7-204ENST00000369329 4911 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.989e-8■■□□□ 14.4
SRSF1Q07955 MAP3K7-205ENST00000369332 4830 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.019e-8■■□□□ 14.4
SRSF1Q07955 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.51□□□□□ -1.699e-8■■□□□ 14.4
SRSF1Q07955 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.28□□□□□ -1.899e-8■■□□□ 14.4
SRSF1Q07955 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.551e-7■■□□□ 14.4
SRSF1Q07955 PKP4-209ENST00000479398 550 ntTSL 519.29■□□□□ 0.685e-12■■□□□ 14.4
SRSF1Q07955 PKP4-203ENST00000411900 552 ntTSL 49.6□□□□□ -0.875e-12■■□□□ 14.4
SRSF1Q07955 PKP4-207ENST00000457109 520 ntTSL 38.56□□□□□ -1.045e-12■■□□□ 14.4
SRSF1Q07955 ANKRD11-210ENST00000566858 580 ntTSL 415.61■□□□□ 0.092e-6■■□□□ 14.4
SRSF1Q07955 ANKRD11-212ENST00000567699 412 ntTSL 514.76□□□□□ -0.052e-6■■□□□ 14.4
SRSF1Q07955 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.65□□□□□ -0.222e-6■■□□□ 14.4
SRSF1Q07955 ANKRD11-213ENST00000567736 2750 ntTSL 211.34□□□□□ -0.592e-6■■□□□ 14.4
SRSF1Q07955 ANKRD11-206ENST00000562275 2762 ntTSL 510.54□□□□□ -0.722e-6■■□□□ 14.4
SRSF1Q07955 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.7■□□□□ 0.13e-7■■□□□ 14.4
SRSF1Q07955 ACAP3-212ENST00000492936 5319 ntTSL 1 (best)14.54□□□□□ -0.083e-7■■□□□ 14.4
SRSF1Q07955 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.123e-7■■□□□ 14.4
SRSF1Q07955 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.393e-6■■□□□ 14.4
SRSF1Q07955 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.423e-6■■□□□ 14.4
SRSF1Q07955 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.543e-6■■□□□ 14.4
SRSF1Q07955 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.72□□□□□ -1.813e-6■■□□□ 14.4
SRSF1Q07955 DCAF8-216ENST00000495887 919 ntTSL 310.65□□□□□ -0.71e-8■■□□□ 14.3
SRSF1Q07955 GFPT1-203ENST00000493759 524 ntTSL 53.93□□□□□ -1.782e-8■■□□□ 14.3
SRSF1Q07955 FHOD1-207ENST00000567752 4321 ntTSL 211.84□□□□□ -0.512e-6■■□□□ 14.3
SRSF1Q07955 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.852e-6■■□□□ 14.3
SRSF1Q07955 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.222e-6■■□□□ 14.3
SRSF1Q07955 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.112e-6■■□□□ 14.3
SRSF1Q07955 RER1-201ENST00000306256 695 ntTSL 519.89■□□□□ 0.773e-9■■□□□ 14.3
SRSF1Q07955 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.07■□□□□ 0.483e-9■■□□□ 14.3
SRSF1Q07955 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.21■□□□□ 0.193e-9■■□□□ 14.3
SRSF1Q07955 RER1-208ENST00000493207 686 ntTSL 215.2■□□□□ 0.023e-9■■□□□ 14.3
SRSF1Q07955 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.53e-9■■□□□ 14.3
SRSF1Q07955 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.6□□□□□ -0.553e-9■■□□□ 14.3
SRSF1Q07955 ZNF692-212ENST00000478107 1051 ntTSL 519.51■□□□□ 0.712e-6■■□□□ 14.3
SRSF1Q07955 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.07■■□□□ 1.66e-8■■□□□ 14.3
Retrieved 100 of 14,836 protein–RNA pairs in 54.4 ms