RNA–Protein interactions for RNA: ENST00000492936.5

ACAP3-212, Transcript of ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, humanhuman

TSL 1 (best)

Gene ACAP3, Length 5,319 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3-212ENST00000492936 DCAF8L2P0C7V8 631 aa29.86■■■□□ 2.37
ACAP3-212ENST00000492936 SUPT5HO00267 1087 aaKnown RBP28.75■■■□□ 2.19
ACAP3-212ENST00000492936 NISCHQ9Y2I1 1504 aa28.2■■■□□ 2.1
ACAP3-212ENST00000492936 SHROOM4Q9ULL8 1493 aa28.05■■■□□ 2.08
ACAP3-212ENST00000492936 EHMT2Q96KQ7 1210 aa27.85■■■□□ 2.05
ACAP3-212ENST00000492936 PELP1Q8IZL8 1130 aaKnown RBP27.84■■■□□ 2.05
ACAP3-212ENST00000492936 APLP2Q06481 763 aa27.35■■□□□ 1.97
ACAP3-212ENST00000492936 PCGF6Q9BYE7 350 aa27.26■■□□□ 1.95
ACAP3-212ENST00000492936 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.94
ACAP3-212ENST00000492936 TTBK1Q5TCY1 1321 aaPredicted RBP26.99■■□□□ 1.91
ACAP3-212ENST00000492936 CENPBP07199 599 aaPredicted RBP26.93■■□□□ 1.9
ACAP3-212ENST00000492936 ZEB1P37275 1124 aaPredicted RBP26.85■■□□□ 1.89
ACAP3-212ENST00000492936 CCER1Q8TC90 406 aaPredicted RBP26.7■■□□□ 1.86
ACAP3-212ENST00000492936 ERICH6Q7L0X2 663 aa26.69■■□□□ 1.86
ACAP3-212ENST00000492936 TRIM41Q8WV44 630 aa26.58■■□□□ 1.85
ACAP3-212ENST00000492936 RANGAP1P46060 587 aaPredicted RBP26.52■■□□□ 1.84
ACAP3-212ENST00000492936 YTHDC1Q96MU7 727 aaKnown RBP26.28■■□□□ 1.8
ACAP3-212ENST00000492936 MYT1Q01538 1121 aa26.27■■□□□ 1.8
ACAP3-212ENST00000492936 UBTFP17480 764 aaKnown RBP26.26■■□□□ 1.79
ACAP3-212ENST00000492936 NEFLP07196 543 aa26.26■■□□□ 1.79
ACAP3-212ENST00000492936 ATP1B4Q9UN42 357 aaPredicted RBP26.24■■□□□ 1.79
ACAP3-212ENST00000492936 TRIM26Q12899 539 aaPredicted RBP26.01■■□□□ 1.76
ACAP3-212ENST00000492936 PPARGC1BQ86YN6 1023 aaKnown RBP26.01■■□□□ 1.75
ACAP3-212ENST00000492936 HRCP23327 699 aa25.95■■□□□ 1.75
ACAP3-212ENST00000492936 LOC105371045A0A1W2PR82 267 aa25.59■■□□□ 1.69
ACAP3-212ENST00000492936 ITGAEP38570 1179 aa25.52■■□□□ 1.68
ACAP3-212ENST00000492936 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
ACAP3-212ENST00000492936 DAXXQ9UER7 740 aaPredicted RBP25.47■■□□□ 1.67
ACAP3-212ENST00000492936 HNRNPUL2Q1KMD3 747 aaKnown RBP25.44■■□□□ 1.66
ACAP3-212ENST00000492936 POLR3GLQ9BT43 218 aa25.39■■□□□ 1.65
ACAP3-212ENST00000492936 DIEXFQ68CQ4 756 aaKnown RBP25.25■■□□□ 1.63
ACAP3-212ENST00000492936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.23■■□□□ 1.63
ACAP3-212ENST00000492936 CNGB1Q14028 1251 aaPredicted RBP25.19■■□□□ 1.62
ACAP3-212ENST00000492936 MYT1LQ9UL68 1186 aa25.08■■□□□ 1.61
ACAP3-212ENST00000492936 RTL5Q5HYW3 569 aaPredicted RBP25.03■■□□□ 1.6
ACAP3-212ENST00000492936 ABCC9O60706 1549 aa24.98■■□□□ 1.59
ACAP3-212ENST00000492936 ZNF316A6NFI3 1004 aaPredicted RBP24.89■■□□□ 1.58
ACAP3-212ENST00000492936 GTF3C3Q9Y5Q9 886 aa24.88■■□□□ 1.57
ACAP3-212ENST00000492936 CLSPNQ9HAW4 1339 aa24.86■■□□□ 1.57
ACAP3-212ENST00000492936 FAM50AQ14320 339 aaKnown RBP24.8■■□□□ 1.56
ACAP3-212ENST00000492936 BCANQ96GW7 911 aa24.77■■□□□ 1.56
ACAP3-212ENST00000492936 SLC4A1APQ9BWU0 796 aaKnown RBP24.77■■□□□ 1.56
ACAP3-212ENST00000492936 NEUROD1Q13562 356 aa24.72■■□□□ 1.55
ACAP3-212ENST00000492936 TRIM52Q96A61 297 aa24.67■■□□□ 1.54
ACAP3-212ENST00000492936 ANP32CO43423 234 aa24.63■■□□□ 1.53
ACAP3-212ENST00000492936 PABPN1Q86U42 306 aaKnown RBP eCLIP24.61■■□□□ 1.533e-7■■■■■ 27.3
ACAP3-212ENST00000492936 CDK11AQ9UQ88 783 aaPredicted RBP24.6■■□□□ 1.53
ACAP3-212ENST00000492936 ACIN1Q9UKV3 1341 aaKnown RBP24.51■■□□□ 1.51
ACAP3-212ENST00000492936 ZNF326Q5BKZ1 582 aaKnown RBP24.43■■□□□ 1.5
ACAP3-212ENST00000492936 ZBTB47Q9UFB7 747 aaPredicted RBP24.26■■□□□ 1.47
ACAP3-212ENST00000492936 ANP32AP39687 249 aaKnown RBP24.2■■□□□ 1.46
ACAP3-212ENST00000492936 CANXP27824 592 aaKnown RBP24.19■■□□□ 1.46
ACAP3-212ENST00000492936 CSRNP3Q8WYN3 585 aa24.15■■□□□ 1.46
ACAP3-212ENST00000492936 FKBP8Q14318 412 aa24.06■■□□□ 1.44
ACAP3-212ENST00000492936 BCL11AQ9H165 835 aa24.05■■□□□ 1.44
ACAP3-212ENST00000492936 NPM2Q86SE8 214 aaKnown RBP24.05■■□□□ 1.44
ACAP3-212ENST00000492936 P3H3Q8IVL6 736 aa24.05■■□□□ 1.44
ACAP3-212ENST00000492936 NEFMP07197 916 aa23.97■■□□□ 1.43
ACAP3-212ENST00000492936 FBLN2P98095 1184 aa23.96■■□□□ 1.43
ACAP3-212ENST00000492936 ARID3CA6NKF2 412 aa23.94■■□□□ 1.42
ACAP3-212ENST00000492936 HNRNPUQ00839 825 aaKnown RBP eCLIP23.91■■□□□ 1.42
ACAP3-212ENST00000492936 SLC24A1O60721 1099 aa23.9■■□□□ 1.42
ACAP3-212ENST00000492936 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.41
ACAP3-212ENST00000492936 TONSLQ96HA7 1378 aa23.88■■□□□ 1.41
ACAP3-212ENST00000492936 DDX10Q13206 875 aaKnown RBP23.87■■□□□ 1.41
ACAP3-212ENST00000492936 ZNF777Q9ULD5 760 aaPredicted RBP23.84■■□□□ 1.41
ACAP3-212ENST00000492936 EIF5BO60841 1220 aaKnown RBP23.84■■□□□ 1.41
ACAP3-212ENST00000492936 FAM9BQ8IZU0 186 aa23.8■■□□□ 1.4
ACAP3-212ENST00000492936 ANP32BQ92688 251 aaKnown RBP23.75■■□□□ 1.39
ACAP3-212ENST00000492936 HSP90AA1P07900 732 aaKnown RBP23.71■■□□□ 1.39
ACAP3-212ENST00000492936 UPF2Q9HAU5 1272 aaKnown RBP23.71■■□□□ 1.39
ACAP3-212ENST00000492936 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
ACAP3-212ENST00000492936 CCDC136Q96JN2 1154 aa23.69■■□□□ 1.38
ACAP3-212ENST00000492936 SALL2Q9Y467 1007 aaPredicted RBP23.66■■□□□ 1.38
ACAP3-212ENST00000492936 NBR1Q14596 966 aa23.63■■□□□ 1.37
ACAP3-212ENST00000492936 MIER1Q8N108 512 aa23.62■■□□□ 1.37
ACAP3-212ENST00000492936 TMC1Q8TDI8 760 aa23.61■■□□□ 1.37
ACAP3-212ENST00000492936 MRS2Q9HD23 443 aa23.56■■□□□ 1.36
ACAP3-212ENST00000492936 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
ACAP3-212ENST00000492936 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.52■■□□□ 1.36
ACAP3-212ENST00000492936 CHIC2Q9UKJ5 165 aa23.51■■□□□ 1.35
ACAP3-212ENST00000492936 CHGAP10645 457 aaKnown RBP23.51■■□□□ 1.35
ACAP3-212ENST00000492936 IRX6P78412 446 aaPredicted RBP23.48■■□□□ 1.35
ACAP3-212ENST00000492936 GLIPR1L2Q4G1C9 344 aa23.48■■□□□ 1.35
ACAP3-212ENST00000492936 CCDC180Q9P1Z9 1646 aa23.46■■□□□ 1.35
ACAP3-212ENST00000492936 WDR43Q15061 677 aaKnown RBP eCLIP23.43■■□□□ 1.343e-6■■■□□ 14.9
ACAP3-212ENST00000492936 HIRIP3Q9BW71 556 aaPredicted RBP23.41■■□□□ 1.34
ACAP3-212ENST00000492936 ARXQ96QS3 562 aa23.41■■□□□ 1.34
ACAP3-212ENST00000492936 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
ACAP3-212ENST00000492936 RB1CC1Q8TDY2 1594 aa23.35■■□□□ 1.33
ACAP3-212ENST00000492936 KDM2AQ9Y2K7 1162 aa23.35■■□□□ 1.33
ACAP3-212ENST00000492936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.34■■□□□ 1.338e-7■■□□□ 12.1
ACAP3-212ENST00000492936 ESF1Q9H501 851 aaKnown RBP23.34■■□□□ 1.33
ACAP3-212ENST00000492936 EIF4G2P78344 907 aaKnown RBP eCLIP23.32■■□□□ 1.326e-7■■□□□ 12.2
ACAP3-212ENST00000492936 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
ACAP3-212ENST00000492936 MTUS2Q5JR59 1369 aa23.3■■□□□ 1.32
ACAP3-212ENST00000492936 CLIP1P30622 1438 aa23.3■■□□□ 1.32
ACAP3-212ENST00000492936 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
ACAP3-212ENST00000492936 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
ACAP3-212ENST00000492936 DDRGK1Q96HY6 314 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms